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Information for unigene UN28793

FASTA Sequence
Unigene ID: UN28793Length: 888 SSR 
GGATGGGGAGACGTATCAGTGGAGCAAGGTTACCACTTCCATATACAACATCATCCTCGAGGAGCTTTACTGCGATCACTATGGAA
CTATGCGTATCAAAGGCGGTGGCAATTACTCCTGCAGGTTGAAGTTCAAGGAGCAGTCAGTCATTGATCGAAACCCTCGTCAGGTT
CATGGGTTTGTGCAGGACAATAGAACTGGGGAGAAAGTAGCTATCCTGATAGGAAAATGGGATGAGGCAATGTACTATGTGTTGGG
TGATCCGACGACAAAGTCAAAGGGATACGATCCAATGACTGAAGCTGTGTTACTGTGGGAAAGAGACAAATCTCCTACAAAAACAA
GATACAATCTCTCCCCTTTTGCAATCTCTCTTAATGGGATAACTCCTGGGATGATGGACAAACTGCCTCCGACAGATTCAAGATTG
AGACCTGACCAGAGACATTTGGAAAACGGTGAATACGAGGCAGCAAATGCTGAGAAACTGAGACTTGAACAGTTGCAGAGACAGGC
AAGGAGGCTGCAGGAGAAAGGATGGAAACCGAGATGGTTTGAAAAAGATGAAGAAGGGAATTATCGGTACTTAGGAGGTTACTGGG
AAGCAAGAGAGAAGAAAGATTGGGATAAGATTACTGACATTTTCAAGAAGCAGCAACAGCGCAACAGTGTTTCATCTTCGTAATCT
TCTCATGTTTTGTTCCTTTATTTGTTCCTTTTTTTTAAATTAATATTATATTGAAAAATCTTCACCATTCCCTCATTGTGCTTCTG
TTGAAAATTTGGCCAGAACCTTTGTTGGTGTGTGTGTGTGCGCGCATTATATGTAGATTCTCAATCAGACTTATGGAGATAGTAAA
TTATCCGATTAGGATTCTGGTTTCTACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172776 oxysterol binding protein-related protein 1D [Arabidopsis thaliana]11858e-128
NP_001184980 oxysterol binding protein-related protein 1D [Arabidopsis thaliana]11858e-128
XP_002892731 oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]11696e-126
XP_002515042 Oxysterol-binding protein, putative [Ricinus communis]10291e-109
XP_002314577 predicted protein [Populus trichocarpa]10281e-109

Swiss-Prot top hits (Blast detail)Scoree value
Q8BXR9 Oxysterol-binding protein-related protein 63091e-027
Q9BZF3 Oxysterol-binding protein-related protein 63082e-027
Q9BZF2 Oxysterol-binding protein-related protein 72713e-023
O14340 Oxysterol-binding protein homolog C2F12.05c2661e-022
P22059 Oxysterol-binding protein 12571e-021

TrEMBL top hits (Blast detail)Scoree value
Q9SAF0 At1g13170/F3F19_1911855e-128
B9RMS3 Oxysterol-binding protein, putative10297e-110
B9HTF9 Predicted protein10289e-110
B8BP57 Putative uncharacterized protein9992e-106
A5BGH2 Putative uncharacterized protein9983e-106

Arabidopsis top hits (Blast detail)Scoree value
AT1G13170.1 ORP1D (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D); oxysterol binding11853e-130
AT4G08180.1 ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C); oxysterol binding / phosphoinositide binding7581e-080
AT4G08180.2 ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C); oxysterol binding / phosphoinositide binding7581e-080
AT4G08180.3 ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C); oxysterol binding / phosphoinositide binding7453e-079
AT4G22540.2 ORP2A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2A); oxysterol binding / phosphoinositide binding7411e-078

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  100%

Unigene MembersMember information