 |
Information for unigene UN28799
| FASTA Sequence |
| Unigene ID: UN28799 | Length: 936 |
SSR | | ATGAAACTGATTCTTGGCATGTGAATGTTCTTTGTTCTCACACTTGCGAGTCCTAGGAAAATTGGAATAAAGACAATCAATAGAGA
ATCTTTATCACTAAAGTTACAAACACAGGGATCAGTTAAGTATGAAAGATCTCAACTGGTCTACTCCTCATCGTTCAAGTTAGCAT
CTTCTTCTTCTTCTTCCACATTGCTCTCTTCTTGCCTTCCTGGAGAATTCTCTTTCTCCATCAATTCACCTTCTTCATCTGATGAA
GAAAGTGCCCTTCTTCGTCTCACTGAAGCAGGTACCCCATCATCATCAGCATCAGGATCTTCAAGCCCCGCAGCAGCAAGAAGATC
ATGAGCATCATCGTCATCCACAGGCTCCTCAGCTTCTTGATTCTCCTCTTCCCTGTTATAATTAGTGTTGGCGTCTTCGTCTTCCA
CTTCATTATGGTCATCCATAGCAGCTGCTTCTTCATCATCGTCCTCGTAATGTCGAGCCCTTGAGCTTTTGTCCTTCTTTCTTTCT
TTTCCGACCTTTCTTTCTTTTCCGCTCACTCGGCCTACCTTCCCCATCATCATCTTCAGCTCTTTCCTTACGCTTATGAGATCCAT
GTGTGTTGCTCTTCCATTGTTCCTTTATGCGTTGAATTTTTTCTTCTTCTTGCTTCAGTCGTCTCAGTTCGTCTTCCTGTTTTCTT
TTCTCCAACTGATATTTCCTATGTTCTTCAGCTTTACGGCGTGCTTCTTCTGCCAAGGCAGCCTGACGAGCAACTTCTAGTCTCTG
CCTGTTCTGCAGCTCCTCACGCTCAGCTTCACGGTGAACTTTTGCTCCTTCTAGCAGGTGTGTGCAATATTGAACATGGGTTTGTA
TTTTCTTACTATCAAACCCATGAACATGTAGATCTGAAGCAGCAGACAACTGAGTGAATACGCGAACAGCGTTCTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885818 hypothetical protein ARALYDRAFT_480219 [Arabidopsis lyrata subsp. lyrata] | 664 | 2e-067 |
| AAM15237 putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana] | 643 | 6e-065 |
| NP_178674 protein early flowering 8 [Arabidopsis thaliana] | 643 | 6e-065 |
| XP_002516292 tpr repeat nuclear phosphoprotein, putative [Ricinus communis] | 514 | 6e-050 |
| XP_002279485 PREDICTED: hypothetical protein [Vitis vinifera] | 508 | 3e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q75JC9 Uncharacterized protein DDB_G0271670 | 157 | 6e-010 |
| O94317 Uncharacterized serine-rich protein C215.13 | 149 | 5e-009 |
| P87179 Cell wall integrity and stress response component 1 | 147 | 9e-009 |
| P36044 Protein MNN4 | 145 | 1e-008 |
| O13695 Uncharacterized serine-rich protein C11G7.01 | 134 | 3e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B5X0I6 VERNALIZATION INDEPENDENCE 6 | 643 | 4e-065 |
| Q8S8H1 Putative TPR repeat nuclear phosphoprotein | 643 | 4e-065 |
| B9RRC3 Tpr repeat nuclear phosphoprotein, putative | 514 | 4e-050 |
| B9MSY1 PAF1 complex component (Fragment) | 507 | 2e-049 |
| B8B5Z7 Putative uncharacterized protein | 454 | 3e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
