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Information for unigene UN28821
| FASTA Sequence |
| Unigene ID: UN28821 | Length: 697 |
SSR | | GGACTTCAGCATAATAATTTGAGCATCGATGGCGATTACGTTTTCAAATCTCCACACAGAGCAAGGTCTCAAAACTGTTGAGGAAC
ACCTCTCGGGGAAAACTTACATCTCCGGCGATAAGCTTTCAGTGGATGATGTGAAGGTTTATGCTGCCGTGTTGGAGAAACCAGGT
GATGGTTTCCCAAACGTTAGCAAGTGGTATGATACCGTTGCTTCCCATCTTGCTAAAGTTTTCCCGGGAAAGCTGTCGGAGTGAAA
ATTGGTGGCGGTGTTGCTCAGTTCGGAACTCCGCCGAAAACAGAGGCACCTGCTGCTGCTGCTGGAGCTGATGCTGATGATGATGA
TATTGATCTTTTTGCTGATGAGACAGAAGATGAGAAAAAGGCTGCAGAGGAGAGGGAAGCTGCTAAGAAAGATACCAAGAAACCTA
AAGAGAGTGGAAAGTCATCTGTGCTACTTGATGTAAAGCCATGGGATGATGAAACCGATATGAAGAAGTTGGAAGAAGCTGTCCGT
AGTGTTCAGATGCCTGGTCTCTATTGGGGAGCTTCGAAACTGGTACCGGTTGGTTACGGGATAAAGAAACTCACTATAATGATGAC
AATTGATGATGACCTTGTCTCTGTGGACAACCTCATTGAAGACCATCTCACCTCAGAGCCTAACAACGAGTACATCCAAAGTGTCG
ACATTGTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871512 hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata] | 680 | 2e-069 |
| NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 663 | 2e-067 |
| AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 663 | 2e-067 |
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 638 | 1e-064 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 634 | 4e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84WM9 Elongation factor 1-beta 1 | 663 | 8e-069 |
| Q9SCX3 Elongation factor 1-beta 2 | 634 | 2e-065 |
| P29545 Elongation factor 1-beta | 548 | 2e-055 |
| O81918 Elongation factor 1-delta | 513 | 2e-051 |
| P93447 Elongation factor 1-delta | 509 | 6e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29PY2 At5g12110 | 663 | 1e-067 |
| Q1XG58 Putative elongation factor | 582 | 3e-058 |
| B6SIK8 Elongation factor 1-beta | 557 | 2e-055 |
| B6SLK4 Elongation factor 1-beta | 557 | 2e-055 |
| A9P7W8 Predicted protein | 554 | 5e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 663 | 7e-070 |
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 634 | 2e-066 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 500 | 6e-051 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 499 | 8e-051 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 499 | 8e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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