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Information for unigene UN28825

FASTA Sequence
Unigene ID: UN28825Length: 959 SSR 
GATTCGTTTGCTCAATCTGATCAAGAATATGCGTATGAAAATGCCAAGCAGCAGACAAATAATGCATTTGATACCTCACAGACAAG
CATGCAGAATCTTGCTTCATTAACAAATGTGATGCAAGGGTATTCAGACGCTACTCCAAACACTCTATTGGGACAAACAGCACAAA
GTGCGAGGGAGCTTGAGCTTCAGTACTCGACTTTCCCAGGGGGACAGTCGATGCCATCAATAAGCAACGATTACTCACTAAATGAC
CAAAGCATTTCTATGCCAGGGGCGCTAAGAGATGGTGGTGGTTTTCAAACAACGCAGCCAAGCCAGCAGCAGAACTTACCTGGTGC
CAATATTGCTACTGGACCAGCTCTTCCTCAAGGACCTCAGCAGCTTCCAATGCATCCATATTCTCAGCATACTGTGCCTCTAACTC
ACTTTGCCAACATGATCAGTTACCCTTTGATGCCTCAGGGCTACCCATACATGCCCTCTGCTTTCCAGCAAGCGTTTTCTGGTAAT
AGCTCATACCACCAGTCACCGGCCGCTCTGCTTCCTCAGTACAAAAACAACATTTCCCCCAGTAGTTTGCCTCAGTCTGCCCCCAT
CTCCTCCCCATATGGATTCGGGAATTCGAGCAATGTTGGAGCCGGGAACTTCTCTCTTAACCAACAACAACAACAACAGGCAGCTC
CAACTGGTGCAACACTTAGTTATGAAGACGCTCTTAGTCTACAATACAAACAGAACAGCCATCTTTTGTCACTTCAGCAACAACAT
CAACAACAACAACAGCAGAATGAAAACTCGGCTGTGTGGCTTCATGGACCTGGTTCTCAACATGTCGAGTGTCAGAGCATGCGTAC
TACACTTCAGCGCACAGCAGCTCAGCACTCGACAGCTCAGCACAGCGCACAGCATACGATCGCTCGCTACCAACTACTACAGTCAC
AACCGGATGTCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881327 hypothetical protein ARALYDRAFT_321144 [Arabidopsis lyrata subsp. lyrata]9984e-106
NP_174229 uncharacterized protein [Arabidopsis thaliana]8793e-092
NP_174230 Kinase-related protein [Arabidopsis thaliana]8766e-092
AAL58943 At1g29350/F15D2_27 [Arabidopsis thaliana]8758e-092
XP_002893558 hypothetical protein ARALYDRAFT_473146 [Arabidopsis lyrata subsp. lyrata]8731e-091

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8VZT4 Putative uncharacterized protein At1g293708764e-092
Q8W0Z3 At1g29350/F15D2_278755e-092
Q9C7R5 Putative uncharacterized protein F15D2.278622e-090
Q9C7R4 Putative uncharacterized protein F15D2.288594e-090
B9I113 Predicted protein6533e-066

Arabidopsis top hits (Blast detail)Scoree value
AT1G29350.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: kinase-related (TAIR:AT1G29370.1); Has 13611 Blast hits to 7582 proteins in 387 species: Archae - 0; Bacteria - 354; Metazoa - 5683; Fungi - 1538; Plants - 892; Viruses - 68; Other Eukaryotes - 5076 (source: NCBI BLink).8791e-094
AT1G29370.1 kinase-related8762e-094
AT4G18150.1 unknown protein2633e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
61  50%

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