 |
Information for unigene UN28838
| FASTA Sequence |
| Unigene ID: UN28838 | Length: 1050 |
SSR | | GGGACCCACAACCCCGCACACACTCTTCTCCTCCCCAATCTTCATCCCCACGGTTCTATCACTTACTGTCTTCTGTATCGAAAGTT
ATCGTATTCTTCAATTTTCTTTTAAAAAGTCATATTTTTCATGGAAGCTAGAAGACTCGCGATCCTATGTTCCCATCTCAACCCAG
CTGGTCCTTACCCACCCAGAGACTCGATTCTCAGGGTTTCCGATTGTAGCTCCGGCGAAGACAAGGTCGAATCATCCAATCTCCAA
AACGACTGCGTTTTCTGCAAGATTGTCCGTGGCGAGTCTCCTTGTCTCAAGTTGTACGAGGATGATATGTGTTTGTGCATTTTGGA
CACGAGTCCACTTATCCATGGGTAATCAAACACTCTCATTCTACTCTCTAGTTTTGACTATTTAGTACTAAGACTATGCTTAAGGC
CTCCATTTTTTTTTTTTTTTGATTAGTGGATTGCATTATGAACATGTTTTTTTTGCTTAGTGGAATTCCAAAAGCTATCAGCTTTT
TTTTTTTAATCTGGTGGGTGTGTTCAGGCACTCTCTTATCATTCCCAAGTTACATTATCCTACCTTAGAGGAAACACCTCCCTCAG
TAGTTGCTGCCATGTGTTCCAAAGTTCCTCTTATCAGTAATGCCCTCGTCAAAGCTACCGACAGTGATTCATTTAACTTGTTGGTT
AACAATGGAGCAGCAGCTGGGCAAGTCATATTTCACACACACATTCACATTATCCCACGTAAGGAACGTGACTGTTTATGGACTTC
CGAGAGCTTGCATAGACACACACTGAAACTGGACAAGGAAGCATCTCAGCTGGTGTCTCGTGTTCTAGAACAATTGTGCAGACCTC
CTGAAGAACAATTGGTTCAGCCCTCCTCATAAGTCCCCTTTTCAAGAGACGTTGTTGTGAACTTTACAATTACACTCTGCCAACAC
AAAAAAGGTCTATTCTGTATAGTTCATATTCACAGCTTCATCTTCATTTTATATATATATACATTCTTCAGTCTGTTTGGTTAAGT
TTATCAGGATTCAAGTAT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863905 histidine triad family protein [Arabidopsis lyrata subsp. lyrata] | 544 | 2e-053 |
| NP_974907 protein histidine triad nucleotide-binding 3 [Arabidopsis thaliana] | 525 | 4e-051 |
| XP_002271191 PREDICTED: hypothetical protein [Vitis vinifera] | 434 | 1e-040 |
| XP_002263165 PREDICTED: hypothetical protein [Vitis vinifera] | 430 | 4e-040 |
| XP_002533497 histidine triad (hit) protein, putative [Ricinus communis] | 421 | 4e-039 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P95937 Uncharacterized HIT-like protein SSO2163 | 162 | 2e-010 |
| Q58276 Uncharacterized HIT-like protein MJ0866 | 134 | 3e-007 |
| P49776 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] | 130 | 1e-006 |
| O07513 Protein hit | 129 | 1e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T5H8 Histidine triad (Hit) protein, putative | 421 | 3e-039 |
| A9PHJ2 Putative uncharacterized protein | 414 | 2e-038 |
| B9GQP2 Predicted protein (Fragment) | 414 | 2e-038 |
| Q8GWE2 Putative uncharacterized protein | 362 | 2e-032 |
| Q672P8 Histidine triad family protein | 356 | 9e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G48545.1 histidine triad family protein / HIT family protein | 525 | 1e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
