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Information for unigene UN28904

FASTA Sequence
Unigene ID: UN28904Length: 1404 SSR 
GGAAAAATCGAGACAGAGAGAGAGAGAGAGAGAGGAGAGATATGCAATCCCGTTCCGCACTCGTCGCCTCTCGATTCCTTAGACCG
GCGTCGAGATTCTTCTCCACCTCTTCCTCCCCGATCACTCCCGTCTCCTCCGCAACAACTCAATCCCCCAGGACCCTCGAGTCTCT
CCGAGCGCGGCTGGCGGACGAGTCCCCTTCCCTCACCGACTTCATCCACGGCGACACCTACTCCGTTGAGGTCGGCACCAAGAAGA
AGCCCCTCCCCAAGCCCAAATGGATGAAGGAGTCGATCCCAGGCGGCGAGAGGTACGTCCAGATCATAAAGAAGCTGAGAGACCTC
AACCTCCACACCGTCTGCGAAGAGGCCAAGTGTCCCAACCTCGGCGAGTGCTGGTCCGGCGGCGAAACTGGAACCGCCACCGCGAC
GATTATGATCTTGGGGGATACTTGTACACGTGGCTGCAGGTTTTGTAATGTGAAGACCTCGCGTACGCCTCCTCCTCCTGATCCTA
ACGAACCGAACAATGTCGCTGAAGCTATCGCGTCCTGGGGTGTTGATTATGTAGTCATCACCAGCGTTGATCGTGACGATCTCCCT
GATCAGGGGAGTGGCCATTTTGCCCAAACTGTACAGAGATTGAAAACATTGAAGCCGGAGATGCTTATAGAAGCTCTTGTTCCTGA
TTTCCGAGGAGATGGTGGGTGTGTTGAGAAGGTGGCCAAGTCAGGGCTCGACGTCTTTGCACACAACATTGAGACGGTTGAAGAGC
TTCAGAGTTTTGTGAGGGATCACCGTGCTAACTTTAAGCAGTCGATGGATGTGCTTAGGATGGCTAAGCAGCATGCGCCCGCGGGG
ACCTTGACGAAGACTTCGGTGATGCTGGGATGTGGGGAGACCCCTGATCAAGTTGTCAAGACGATGGAGAAAGTGAGAGCAGCTGG
GGTTGATGTTATGACGTTTGGACAGTACATGCGACCTTCTAAGCGTCACATGCCAGTTGCTGAGTACGTGACACCTGAGGCTTTTG
AGAGATATCGGCTTCTTGGCATGGAAATGGGATTCAGGTACGTGGCATCAGGGCCAATGGTGAGGTCGTCGTACAAAGCAGGAGAG
TACTACATAAAGTCCATGATAGAGGCTGATCGAGTTTCTTCTCCTTCCTCCTCGTAGATACTCATTCCAAGATTTACGCTTTGTGA
ATTCTTTCACTTTATTTGCTTTGTTTATTCTGAAATAATGATTGAGGAGATGTAATACTTACTATGATTGTCATTTGTGTGTTTGC
TCTTTTCTCTCTTACTATCATTCGTCCTTCAGTCTTTCTCTGATGCTATACGACTTTGCTCCATCGTCTAAGCTCAGTTGCGGTGA
TGATATAATAAACCCTTTTTAGTGGTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884228 hypothetical protein ARALYDRAFT_900465 [Arabidopsis lyrata subsp. lyrata]18089e-200
NP_179682 lipoic acid synthase 1 [Arabidopsis thaliana]17901e-197
XP_002306361 predicted protein [Populus trichocarpa]15955e-175
ABK96318 unknown [Populus trichocarpa x Populus deltoides]15857e-174
Q3LSN5 RecName: Full=Lipoyl synthase 2, mitochondrial; AltName: Full=Lipoate synthase 2; Short=LS 2; Short=Lip-syn 2; AltName: Full=Lipoic acid synthase 2; Flags: Precursor15802e-173

Swiss-Prot top hits (Blast detail)Scoree value
Q5BIP7 Lipoyl synthase, mitochondrial9931e-106
O43766 Lipoyl synthase, mitochondrial9922e-106
Q5XIH4 Lipoyl synthase, mitochondrial9903e-106
Q99M04 Lipoyl synthase, mitochondrial9795e-105
O13642 Lipoyl synthase, mitochondrial9232e-098

TrEMBL top hits (Blast detail)Scoree value
Q9ZWT1 At2g20860/F5H14.1717908e-198
B9H5L9 Predicted protein15953e-175
A9PIW5 Putative uncharacterized protein15854e-174
Q3LSN5 Putative lipoic acid synthase15802e-173
Q3LSN4 Putative lipoic acid synthase15792e-173

Arabidopsis top hits (Blast detail)Scoree value
AT2G20860.1 LIP1 (LIPOIC ACID SYNTHASE 1); lipoic acid synthase17904e-200
AT5G08415.1 lipoic acid synthase family protein9921e-107
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein1292e-007
AT5G38560.1 protein kinase family protein1221e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  100%

Unigene MembersMember information