Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN28955

FASTA Sequence
Unigene ID: UN28955Length: 941 SSR 
GGATCCTTTTAAGCCATGGAAGCTCGGATTTTGCAGTCTTCTTCTTCTTCTTCTTCTGGCTGCTTCTCCTCCGGTTCCATCAAACG
ACACCGTTTCTCCTCCATTTCACAATCTCGCAACCCTCTGCCTCTCTCCGTCAGATTTCCACAGAAGACGAGAAACACAATGGTTT
TATCAATGTCCAAGAAAGATGACGACACGGAGAGTCTCAGCTACAAAGGCTCGGGTGTTGACATCGATGCCGGGACTGAGCTCGTT
AGAAGAATCGCTAAGATGGCTCCTGGAATCGGCGGCTTCGGTGGTCTCTTCCCATTAGGTGATTCTTATCTGGTAGCTGGTACGGA
TGGTGTAGGGACTAAGCTTAAGCTTGCCTTTGAGACTGGAATCCATCACACCATTGGAATCGACTTGGTTGCTATGAGTGTGAATG
ATATTGTTACTTCCGGTGCTAAGCCTCTCTTCTTCCTTGATTACTTTGCTACTAGCCGTCTCCATGTCGACCTTGCAGAGAAGGTC
ATTAAAGGGATTGTTGATGGTTGTGGGCAATCAGACTGTGCTCTCTTAGGAGGAGAGACTGCGGAGATGCCTGACTTTTACGCAGA
GGGAGAGTATGATCTCAGTGGGTTTGCAGTTGGGATTGTGAAGAAAGACTCTGTTATTAACGGGAAGAACATCGTTGCTGGAGATG
TCCTTATTGGCCTCCCATCTAGTGGTGTTCACTCCAATGGTTTCTCTTTAGTAAGAAAGGTGGCGGCTCGAAGCGGTCTTTCGTTG
AATGATGAGCTTCCAGGTGGATCAACTACCCTTGGTGAAGCTTTAATGGCACCCACTACCATTTATGTGAAGCAGGTACTTGACAT
AATCAGCAGAGGAGGAGTGAAAGGTATAGCTCATATAACAGGAGGAGGTTTCACAGACAACATCCCTCATGTTTTCCCTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876282 chloroplast phosphoribosylformylglycinamidine cyclo-ligase [Arabidopsis lyrata subsp. lyrata]12753e-138
NP_191061 phosphoribosylformylglycinamidine cyclo-ligase [Arabidopsis thaliana]12611e-136
AAC37341 5'-phosphoribosyl-5-aminoimidazole synthetase [Arabidopsis thaliana]12611e-136
XP_002275035 PREDICTED: hypothetical protein [Vitis vinifera]11392e-122
CBI36923 unnamed protein product [Vitis vinifera]11392e-122

Swiss-Prot top hits (Blast detail)Scoree value
Q05728 Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic12616e-138
P52424 Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial10941e-118
B8DNV5 Phosphoribosylformylglycinamidine cyclo-ligase6854e-071
Q2Y5R7 Phosphoribosylformylglycinamidine cyclo-ligase6801e-070
Q1D8V5 Phosphoribosylformylglycinamidine cyclo-ligase6782e-070

TrEMBL top hits (Blast detail)Scoree value
A5BS32 Phosphoribosylformylglycinamidine cyclo-ligase11391e-122
Q6T7F2 Phosphoribosylformylglycinamidine cyclo-ligase11372e-122
B9I9L4 Phosphoribosylformylglycinamidine cyclo-ligase11363e-122
B9GSG0 Phosphoribosylformylglycinamidine cyclo-ligase (Fragment)11354e-122
B9RNH2 Phosphoribosylformylglycinamidine cyclo-ligase11328e-122

Arabidopsis top hits (Blast detail)Scoree value
AT3G55010.1 PUR5; ATP binding / phosphoribosylformylglycinamidine cyclo-ligase12615e-139
AT3G55010.2 PUR5; ATP binding / phosphoribosylformylglycinamidine cyclo-ligase12615e-139

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  50%
 
91  50%

Unigene MembersMember information