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Information for unigene UN28968

FASTA Sequence
Unigene ID: UN28968Length: 1423 SSR 
AGTCTCGCCTCCCCCAAAAACCCTCCTGCCCTTCCTTACTTTCAAACCTTTCGTCTCCAGAAATACTCAGAAGATGAGCAACGACA
AGGACAACTTCAGCCTCGCCGATCTCACTGCTGCTCTTAAAGACGAGGATCGAGCCGGCATCATGAACATTCTCAAGAACAAGATG
GCTGGGGACGTGCTCGAGAATCTGTCTCCTCAAGTGAGAGCGCGTGTCGATGCCTTGAAGGATATACAGAGCCAACACGATGAACT
TGAGGCTAAGTTCCGCGAGGAGAGAGCTGTTCTTGAAGCCAAGTATGAACAGTTGTATCAGCCTTTGTATGCCAAGCGTTTTGAAA
TTGTGAGTGGAACTACTGAAATCGAGCTTACTCCAGAGGATACTTAGATGGACGAAGTCCAAGGAGAGGACAAAACTGCTCAAGAG
AAAGGAGTTCCCAGTTTCTGGCTGACTGCTTTGCAAAATAATGATGTTACTTCCGAGGAGGTCACAGAGCGTGATGAAGAGGCTCT
CAAGTATCTTAAAGATATCAAGTGGTGCAAGACTGAAGAGCCTAAAGGATTCAAGCTCGAGTTTCTCTTTGACTCGAATCCCTTTT
TTAAAAACAATGTCTTAACAAAGTCTTATCATGTGATTGATGAGGATGGGCCACTACTTGAGAAGGCTATTGGGACTGAAATCGAT
TGGTATCCTGGAAAGTGTCTAACTCAGAAGATTCTTAAAAAGAAGCCTAATAGAGGTTCAACGAACGCCAAACCAACCACTAAAAT
GGAAGCTTGTGAAAGCTTTTTCAACTTCTTTAACCCTCCTGAAGTCCCGGATGAAGAAAGATATCGACGAGGACAGAGCTGAGGAA
CTTCAGAATCTGATGGAACAAGATTATGACATTGGATCTACCATCCGTGACAAGATTATCCCGCATGCCGTCTCATGGTTTACTGG
TGAGGCTGTGGAAGGACAGGAGTTTGATATAGATGATGATGAAGATGATGATAGTGACGAAGATGATGATGATGATGATGATGATG
ATGATGATGATGATGAAGAGGACGAGGATGATGATGAGATGGAGGATGATAGCAAGACTAAAAAGAAGAAGGGAGGCAGATCTCAG
ATTGTTGGTGATGGTCAACAAGGCGAGAGGCCACCAGACTGCAAGCAACAGTGATCTCGATGCTCTACTGAACAAAAAAGCCATGT
GTAAAAAATATATCTTGGGTCAATTCTCAGTTCATCTAGCATTGAGAATTGAAGAAAAATATTTTAGTTGTTTTTTTATAGTGTAA
ACCTCATTTCCTTATTGATGATGTTCTCATTCGAGTTTTGATAATTTGTTGTGGTGTTTATTTTCGTTGAATGATTTAAGACTTAA
TTAATACCTTGGTGTTTATGAATGAATGAAAACATCATCCCCTTGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAA50234 nucleosome assembly protein I-like protein; similar to mouse nap I, PIR Accession Number JS0707 [Arabidopsis thaliana]10954e-117
NP_194341 nucleosome assembly protein 1-like 1 [Arabidopsis thaliana]10767e-115
NP_001119060 nucleosome assembly protein 1-like 1 [Arabidopsis thaliana]10767e-115
XP_002869628 hypothetical protein ARALYDRAFT_492203 [Arabidopsis lyrata subsp. lyrata]10571e-112
BAA97025 nucleosome assembly protein [Arabidopsis thaliana]10231e-108

Swiss-Prot top hits (Blast detail)Scoree value
P25293 Nucleosome assembly protein1954e-014
Q08438 Protein VHS31883e-013
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745571883e-013
Q8I3Z1 MATH and LRR domain-containing protein PFE0570w1775e-012
P31231 Calsequestrin-11741e-011

TrEMBL top hits (Blast detail)Scoree value
Q38809 Arabidopsis thaliana Col-0 nucleosome assembly protein I-like protein (Fragment)10953e-117
B3H684 Uncharacterized protein At4g26110.210765e-115
Q9SZI2 Nucleosome assembly protein I-like protein10765e-115
Q94K07 Nucleosome assembly protein10237e-109
Q9LTS5 Nucleosome assembly protein10237e-109

Arabidopsis top hits (Blast detail)Scoree value
AT4G26110.1 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding10763e-117
AT4G26110.2 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding10763e-117
AT5G56950.1 NAP1;3 (NUCLEOSOME ASSEMBLY PROTEIN 1;3); DNA binding10234e-111
AT2G19480.1 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding9482e-102
AT2G19480.2 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding / binding9482e-102

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  100%

Unigene MembersMember information