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Information for unigene UN29067

FASTA Sequence
Unigene ID: UN29067Length: 1003 SSR 
AAGGACAAATCTCAAAAGGATTGATTATTGGTAGGACTTTTAGTTGTCTCTTACTTGTATGACAAGTAATAAAGAGACCCTAAGAT
AAATCAGATATTTTTGTCAACTGAGAAGTGTGAAATGCGGTTTCTGTTCTGATCATAGATGATGAATACAAAAAAGTGAAGCAGAA
GCAAAGTAATACACTTCAAGACTAAGCAACGAACCAAAAGACTAACCCGAGTGCGAATGCACCAGACGATTGGAGAAGAAAACCAA
GAAGAGCCGAGACGAGGATTGCAAATCCAGCAAAAACCTTTGTGGAAGAAATGGTTTTCTTGAAGAGTACAAACTCTGCAAGGACG
ATGGTTGGTGTCACAACGATCTTAGCCATCTGGTAGAAACCAACACTGTTGTGTTTGAGGCTGGTATTGGCGAGACCAGAAGCAAA
GGCCATGACAGCTCCAAGAGAGAAAAGAAAGGAGAAAGGTGTGCTCTTTGATGGAGGAGACATAGGAAGAAGTGAGAGAGATTTGA
AAAAAGCTAGAAGAATCCAAGCAACGGCATAGTGAATCCAACTCTTCCCATCACCTGCAAAAAAACAAAAGTTTTAATAACAGAGA
GACACAGAAGAATATAAGATTAGAAAGAAAAGGATAATGCCAACAGCTCCTTCTGATGTTTTAAGCTCGTTGTATAAAAAGCATCT
GAGTTCTTCCAAAGCTCGTCCTGCTTCTGCAGCATCACTGTCTTTCCTTTTGAGAAATTTTCTTGCATCTTTTCTAAACAAGGAAT
CAACCAGACCCATCATACACACACACACACAAAATTTATAAAAAAAAATGAAAATTTTACAATCCTTTGGGGATCGATCAATCAAT
CTCTGATTGTTTCAAGGCTTGTTATGAGAAACCCAGATCACATTTCTCATTTCGATTGAAAATCAAATTTTGTTTTTTTTGTCTGA
AGAAGCCGAGAAAGAGAAGAGATGGATTTGAGAGAGAGAAGATACATCGACATCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM65010 unknown [Arabidopsis thaliana]5747e-057
NP_200406 Nucleotide/sugar transporter family protein [Arabidopsis thaliana]4232e-039
ABK28760 unknown [Arabidopsis thaliana]4232e-039
XP_002866120 hypothetical protein ARALYDRAFT_495677 [Arabidopsis lyrata subsp. lyrata]4232e-039
XP_002522795 organic anion transporter, putative [Ricinus communis]3741e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q8RXL8 Uncharacterized membrane protein At1g068901317e-007

TrEMBL top hits (Blast detail)Scoree value
Q8LB26 Putative uncharacterized protein5745e-057
A0MFP6 Putative uncharacterized protein (Fragment)4232e-039
Q9FG70 Gb|AAF04433.14232e-039
B9S9X6 Organic anion transporter, putative3747e-034
B9GG03 Predicted protein3471e-030

Arabidopsis top hits (Blast detail)Scoree value
AT5G55950.1 transporter-related4239e-042
AT5G57100.1 transporter-related2652e-023
AT2G30460.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: transporter-related (TAIR:AT1G06890.2); Has 782 Blast hits to 581 proteins in 90 species: Archae - 0; Bacteria - 6; Metazoa - 140; Fungi - 34; Plants - 501; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).1334e-008
AT2G30460.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: transporter-related (TAIR:AT1G06890.2).1334e-008
AT1G06890.1 transporter-related1316e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information