Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN29113

FASTA Sequence
Unigene ID: UN29113Length: 1119 SSR 
GGTGCAGCAGCAGCAGCAGCAACAAATCTCTGTTGGTGGTCGTGTTACTGGACAGAATGTTCAGAGCAGTGGAATGATGATGCCTG
TAGGAGGAGGGACATCAATGCTACAGTCGCTCGGACAGCAGCAACAACAAGTGATGTTGTCAAGTAGTGTTCCAAGGAGAAGCGAA
CTCACCGAGTCAAGCAGCAGCTGTAGAGTGTTACCAGCAGCTCCTACACACTCGGTGGCCTTTAATAAATTTTCTTCGGAGCTACC
TAAAACAGCTTCCCGTTGGCAAGTGCACCGGGGATATCAGTTTCTTACCAAGAAGAGGTCAACAGCTCAGACGCAAAAGGTGTTAC
TGCTACTACTACTACTACTGCAGGGTTTGGTAACCCTAGCTACGACATATTCAATGATTATCCGCAGCACAACAACAACAATGATT
GGGATCTGCAGAATATCGGCATGGTCTTTAGTTCTCATCAGGACACAACAGCAGCAGCAGCAGCATCTGCCGCTTTTTCATCTTCG
TCTTTCACTCAGAGAAAAAGGGCTGAGCATGTGCAGAACCACCACCAGCAACAGCATTTGCCAAGCCAGAGTCTTAATCACATGAA
CGGTGGTGGTTCGGTTAGAGTGAAGTCAGAGAGAGTGGCGGAGACGGTGACTTGTCCTCCAGCAACAACACTGTTTCAAGAGCAGT
ATAACCAAGAAGATTTCATGAGCGCACTTCTCAAGCAGGAAGGACTTCCATTGGTAGATAACGAGTTCGACTTTGACGGATACTCC
ATCGATAATATTCCTGTCTGACCTCACCCACACATATACTCACTCTTTAAAGAGTAGACTTCAAGATTCTTTGTTTCTCATCAAAA
GGTAACAAGAAAACTCCACAAATGGCGATAGTCCAAGCGGATCATCATGTACTGTATCTTTAGATGATATAATTTGCGAGGAAAAA
TTCAAAAGCAGAATAAATTACTTTACTTTGTTTTCTTCTTCTGGTTATTAGGAGTAATGTGAATTTGCTGCAGATTGTTTTTGTAT
TTTTTTCCTTACACAAAGCCTTGAGACATGTAGGGTTCTTGATCTTATAATGTACCACAATTTAGCAATGTTTTGCTTCTCTTTCT
T

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870182 hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp. lyrata]6213e-062
NP_193346 two-component response regulator ARR2 [Arabidopsis thaliana]5944e-059
ABF19058 ARR2 [Arabidopsis thaliana]5873e-058
CAB10390 hypothetical protein [Arabidopsis thaliana]4951e-047
BAD43141 hypothetical protein [Arabidopsis thaliana]4134e-038

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZWJ9 Two-component response regulator ARR25942e-060
Q940D0 Two-component response regulator ARR14086e-039

TrEMBL top hits (Blast detail)Scoree value
Q680A8 ARR25943e-059
C3PTB4 ARR25872e-058
Q682I9 Putative uncharacterized protein At4g161104133e-038
Q67YH9 Putative ARR1 protein4081e-037
B9DFS4 AT3G16857 protein2951e-024

Arabidopsis top hits (Blast detail)Scoree value
AT4G16110.1 ARR2 (ARABIDOPSIS RESPONSE REGULATOR 2); transcription factor/ two-component response regulator5951e-061
AT3G16857.2 ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1); transcription factor/ two-component response regulator4094e-040
AT3G16857.1 ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1); transcription factor/ two-component response regulator3002e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information