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Information for unigene UN29199

FASTA Sequence
Unigene ID: UN29199Length: 1100 SSR 
GGGTAGAAGCAGAGATAGAAAGAGAACACAGCTTCTTCTTCTTTCTTCTTAAAAGCTTCTCTCCCATGTGGAACCCAAAACCTTCA
CTTCTCCCATTCCCTCACATTTCCAAACCAACATTCTCCCTCTGACACTCACTCACTACCTACAACTTCCACACCAATGCTCTGCT
TCCTTCCTGCAAACTAGAGAAAAAAAAACTCCAACCTCACCAGTAACGATGCCGCTTCCTCACTTCTCCACCACCATTTTCCTCCT
CTGCCTCTTCTTCTTCACACTCCTCGAAGCCACTAATCTCACTCTCCCTCACCAACATCCTTCCCCTGACTCCGTCGCTCTCCACG
TCTTAAGTTCAATCAATGCAGGTGACGATCGCGTTTAATCATTTCGGACAGGGGCTTGTTCAGAGGATGCCGAGGTGTCGGAGAGG
GTATATACATGTGGTGAGTAATGATTTTACTTCGTGGAAGATGTATGCGATTGGTGGTAGTGGTAATCCTATTAATAGTCAAGGGA
ATCGTTACATTGCTCCTTCTGATCCTAGCGCCAAAGAGGTGACGAAGCGGGTGGATTCAAAGGACGATGGAGAGTGGTCGAATTGG
AATTGGAGAACGGAAGGAGATCTGATGGAGAACGGAGCTTTCTTTGTGGCGTCTGGTGGAGGAGTGAGCGCATTGTTCTCTAAAGC
TTCCAGTGTGGAGCCTAAAGCTTCCGCTCTTGTAGACCAACTCACTCGAAACGCTGGCGTTTTTGGCGGTCCCAGGGATGATCAAG
GTCAGAGTGGCGATTCTTATTCTGGTTATGGAGGTGGAGGTGGGGGTGGTGGTGTTGGTGGTGGTGGTGGTGAAGGCGGCAGCAGC
GGCAGCAATGGAGGAACCAGTGCTATTGGCGGAACAACGAGAGGAAGTAGCACCGTCAGCAGCGATGACAACAATGTCTTCGGGAT
GATCTTCGGAAGCAATGCACCGCCTCGACCACGTTTAACGTGTGTGTTTTCTTTGATAATGATTTGTGTTTTGTCATTATCAACTC
TATTATTGTTGTAGTCCGCAAGGATAACTAATAGGATTTGGAGACCCTTCAATTGATTGGTTGTTGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAQ87025 pectate lyase-like protein [Brassica napus]11097e-119
NP_191052 putative pectate lyase 13 [Arabidopsis thaliana]9412e-099
XP_002876277 hypothetical protein ARALYDRAFT_485907 [Arabidopsis lyrata subsp. lyrata]7763e-080
CAB41092 pectate lyase-like protein [Arabidopsis thaliana]7682e-079
EEC67092 hypothetical protein OsI_33884 [Oryza sativa Indica Group]6204e-062

Swiss-Prot top hits (Blast detail)Scoree value
Q93Z04 Probable pectate lyase 139704e-104
Q9SCP2 Probable pectate lyase 125036e-050
Q944R1 Probable pectate lyase 154651e-045
Q9SVQ6 Putative pectate lyase 144633e-045
Q940Q1 Probable pectate lyase 14581e-044

TrEMBL top hits (Blast detail)Scoree value
Q6U6I9 Pectate lyase-like protein11095e-119
B8BH93 Putative uncharacterized protein6202e-062
B9G630 Putative uncharacterized protein6202e-062
C5WZH2 Putative uncharacterized protein Sb01g0201806104e-061
Q27U75 Pectate lyase (Fragment)6104e-061

Arabidopsis top hits (Blast detail)Scoree value
AT3G54920.1 PMR6 (powdery mildew resistant 6); lyase/ pectate lyase9704e-105
AT5G04310.1 pectate lyase family protein5922e-061
AT3G53190.1 pectate lyase family protein5035e-051
AT4G13710.1 pectate lyase family protein4651e-046
AT4G13210.1 lyase/ pectate lyase4632e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information