Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN29299

FASTA Sequence
Unigene ID: UN29299Length: 1250 SSR 
GCTGAACTTAAGACCTCTCTACTGATGAAAACCAGGTTTCTTGGTGGCGACCACAAAGAAAGAGAGAGAGAGCTTTATGGGATAGC
TAAGGTTAAACATCTCCTTAAATAATAACCTGAAGAAAGGGGTCTAGCTAGTTGCTACATTAACAATGTTACAAGGAACACAGAGA
TCTGTCTCAATTCTCCGAGATTTCTGGTTTTAACATTCTCAGATAAAATCTACAACAACAAAGAAGATATTTACAGCATTCACATT
CTGCACGTATGCTGCTGCTGCTGCTGCTGCTTCAATAGCTAAGAAGGTAGTAAAATAGGAAGAAAGATTAAATACTGTCTCGTTCT
GAATCATCCGCGAGTCAAGTCAATATCAGTGAATAGGTTTCTTCCGCTAATAGAGTCAAGTGATCTGCCTGAAACTGAGACTGAAC
CTTCCCCTGAACCGGGCCATCCACTCATTCCCTGACCTGAGAAGTTCTGTGGCGTCTCCTGACCCACCTGTGCTTCTTCTTCTTCT
TCTTCTTCTTCTTGTGGATTAGTCTCCATTTCGCTATCCTTGTGCTCTTCCTTTGGTTTATTTTCTTGTTTGATAGTCTTGTTACT
GTTATTAACTCCTACGTATATAAAACTACAAGCCACAACCTGAACGAGGCTGGCTGCAATAAGCATTCCAATCCCACCGCCAATAA
CATGACCTTCAGGACCAGAAAGGGAGACACTCAAACCGCCTGTTCGGCTTTTGGATCCACCTTCTTCATTCACCAAATAAGATCCC
CCTAGACTTAGTATCTCAAAACGTCCCTCATATGTCAAAGAAGACTCTGTTGTAGCGGGTTGACGTAGAGTGACTGAAGAAACTGT
TCCGGTGCCTGACATTATACAAAGAGCTCGAGGTCTTTGCTGTGAGAATGACATGACTTTTGAAACGATATCTTCTCCTGCTCCAA
CACTGATGACATGAGGTGCAAAAGCAAGTCCAGCTGAAGTGTTCATCCACTCACCAAGATTAGCTAAACGTTGCTTCCTTCCAGTA
CCAGGAGGTCGACCTCTAGCTCGTTTAGGAGCATTTGGATCAGTCACTGCAGAAGAGTCCTTAGCTGCTTTACTACTACCACCAGA
AGAACAAGGCACAGGAGAAAGCCCTAAAGAGACTTGTCCATCAGGAGGAGCGTACTTCCTCGGCCGTCCACGCTTCTTCTTAACCA
ACGGCTGCTCCATCTGTGGCGGCTGCAGCGGCTGCACAGAAGCAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF19697 F2K11.15 [Arabidopsis thaliana]11124e-119
NP_176536 AT hook motif DNA-binding family protein [Arabidopsis thaliana]11115e-119
XP_002886400 hypothetical protein ARALYDRAFT_315069 [Arabidopsis lyrata subsp. lyrata]11107e-119
AAL49880 putative DNA-binding protein [Arabidopsis thaliana]8751e-091
NP_176537 AT hook motif DNA-binding family protein [Arabidopsis thaliana]8751e-091

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7C9 Putative DNA-binding protein ESCAROLA2402e-019

TrEMBL top hits (Blast detail)Scoree value
Q9SH33 F2K11.1511123e-119
Q8GXB3 AT-hook motif nuclear localized protein 511114e-119
Q8LPN5 AT-hook motif nuclear localized protein 128758e-092
Q8VYP4 Putative DNA-binding protein8758e-092
B9RCB0 DNA binding protein, putative7314e-075

Arabidopsis top hits (Blast detail)Scoree value
AT1G63470.1 DNA-binding family protein11157e-122
AT1G63480.1 DNA-binding family protein8792e-094
AT2G45850.1 DNA-binding family protein5271e-053
AT2G45850.2 DNA-binding family protein5271e-053
AT4G12080.1 DNA-binding family protein5011e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information