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Information for unigene UN29361

FASTA Sequence
Unigene ID: UN29361Length: 1014 SSR 
GGGGAGTGTGTGTGTGTTGTCTGTTGGGTCTTTTATTACACACAAATAGATGAAACGAGGAAAGCTATTACTTCTTTTGTAACATC
CATAAACAGATCCTTCCTTTCGCAGAGAATCGAGATTATCAAACAAGGAGAAAGAGATGGTGAGGGGAAAAACTCAGATGAAGCGA
ATAGAGAATGCAACAAGCAGACAAGTCACTTTCTCTAAACGAAGGAATGGTTTGTTGAAGAAAGCCTTTGAGCTCTCAGTGCTTTG
TGATGCTGAAGTTTCTCTGATCATCTTCTCTCCTAAGGGAAAACTTTATGAGTTCGCCAGCTCCAATATGCAAGATACCGTAGATC
GTTATCTGAGGCACACCAAGGATCGGGTCAGCAGCAAACCGGTTTCTGAAGAAAATATGCAGCATTTCAAACATGAAGCAGCAAAC
ATGATGAAGAAAATTGAACAACTTGAAGCTTCCAAACGTAAACTTTTGGGAGAAGGCATAGGATCATGCTCGATTGAGGAGCTGCA
GCAAATTGAGCAACAACTCGAGAAAAGTGTCAAATGTGTTCGAGCAAGAAAGACTCAAGTGTTTAAGGAACAAATTGAGCAGCTGA
AGCAGAAGGAGAAAGCTCTAGCTGCAGAAAACGAGAAGCTCGCTGAAAAGTGGGGATCTCATGAAATCGAAGTTTGGTCGAATAAG
AACCAAGAAAGTGGACGAGGTGACGAAGAGAGTAGCCCAAGTTCTGAAGTAGAGACACAATTGTTCATTGGGTTACCTTGTTCTTC
AAGAAAGTGAAGCAACTACTATTCCAAGAACAACAAAAACAAAACAAAGCAAAAAACATATATGTAAAAACGGGTTAGCAGTGAGT
GTATAAGGACAAGTAACAACGCTCTAAAGCTGTTTCTCTTGTTATCTTCTTTCTCTCTCTCACTCACTCTCTTCTTTAAAACTGAA
CTGCCTGTGGTATGTATCTATGTTCTTATACACTTGCCTTCTCTAGAATCTAATTATGTTTATTGTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAB41526 transcription factor SaMADS A [Sinapis alba]10675e-114
ABP88100 MADS-box protein AGL20 [Brassica rapa subsp. chinensis]10631e-113
AAQ54337 MADS-box protein [Brassica rapa subsp. campestris]10352e-110
NP_182090 MADS-box protein SOC1 [Arabidopsis thaliana]10325e-110
AAP20424 MADS-box protein [Cardamine flexuosa]10325e-110

Swiss-Prot top hits (Blast detail)Scoree value
O64645 MADS-box protein SOC110322e-111
O82743 Agamous-like MADS-box protein AGL195709e-058
Q9XJ60 MADS-box transcription factor 505502e-055
Q38838 Agamous-like MADS-box protein AGL145189e-052
A2Z9Q7 MADS-box transcription factor 565035e-050

TrEMBL top hits (Blast detail)Scoree value
Q41275 Transcription factor SaMADS A10673e-114
A5A3Z8 MADS-box protein AGL2010639e-114
Q6VAK7 MADS-box protein10352e-110
Q84MI2 MADS-box protein10324e-110
Q84MI3 MADS-box protein10315e-110

Arabidopsis top hits (Blast detail)Scoree value
AT2G45660.1 AGL20 (AGAMOUS-LIKE 20); transcription factor10332e-112
AT5G62165.1 AGL42 (AGAMOUS LIKE 42); transcription factor5805e-060
AT5G62165.2 AGL42 (AGAMOUS LIKE 42); transcription factor5805e-060
AT5G62165.3 AGL42 (AGAMOUS LIKE 42); transcription factor5805e-060
AT4G22950.1 AGL19 (AGAMOUS-LIKE 19); transcription factor5708e-059

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information