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Information for unigene UN29393
| FASTA Sequence |
| Unigene ID: UN29393 | Length: 1081 |
SSR | | TGGGATTGTTATTCTCTTTCTTCTAGAATTTGGGGGTTTGATTTGGATCATCAAATCAAATCAAATCAAATCAAATCTAAGAGGGT
GCTGATGGCATCGTCGTCGGGGAAGGTGGAGAAGGGGCACGAGCTGTACAGGGAGGGCAAGTACAAGGAGGCTCTTGTCTTGTACA
CAGAGGCTCTCACGGCGGCTAAGTCCAAGTCCCAGAAGATCGCTCTTCACAGCAACCGCGCCGCCTGTTACTTGAAATTGCACGAT
TTCAAACAGGCAGCAGAAGAATGCACGTGGGTGCTAGAGCTAGATCAGAAACACAGCGGTGCTTTGATGCTGAGGGCCCAGACATT
AGTCACTCTTAAAGAGTACCATTCTGCTCTTTTTGATGTCACCAGGCTCTTGGACTTGAACCCTGATTCTGAGGTCTACCAGAACC
TCGAGGCTCGCTTAAGGACCCAGTTGTCCCTTGCTCCAATTCCTGAATCTGAAGCAGAGTTGGAAAATGAAGATGATGAAGACACA
GATGAACAGTCAAGTAGGAAAGATGAGAGTAGGAGGTTTGAGTCATTAGTTTCCATCACAAGAGATGTAAGAAACAAGGGGGAAGA
AGTTGTTGCACCTAAAACACCTGAGGTTAGAGATGACAAGAGCAAGGATGATGCATGGCAAGCCATCCCTAAGCCCAAGGGTCATT
CCACACTCGACTATGCCCGTTGGGATACTGTTGTTGAAAACGATGACTCCAGTCAAGAAGATGACAGCGATGAAGACAGTGACGAC
GATGAGGCTCAGCCTCAGTACAGATTCCGTGTTAGAACCGTCGGTGTTCGTCCTGTGAAGTGATAAAAAGGGTGTATAGATGGATG
GTTTCTTTCTTTCCTTGATATTGTTGTTGCACACAAGAGCTGTGAAAAGAGAAAAGCCATAAGGGAGCAGCAGACTGTTCCTGCCC
TGTGATGTTATACATATTCGTTAAGAAAACACATGTATAAGTCTAGATGTGATGTCACAATATACAAGAGGACCATTATCAAATGA
AATGGTTCCTTTTTCTCTTGGTCAATGCAGTTTCATTATACAACATTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002894556 tetratricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 887 | 4e-093 |
| ABR17853 unknown [Picea sitchensis] | 642 | 1e-064 |
| NP_564708 tetratricopeptide repeat-containing protein [Arabidopsis thaliana] | 635 | 6e-064 |
| XP_002266045 PREDICTED: hypothetical protein [Vitis vinifera] | 589 | 1e-058 |
| XP_002532370 heat shock protein 70 (HSP70)-interacting protein, putative [Ricinus communis] | 572 | 1e-056 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q99KD5 Protein unc-45 homolog A | 195 | 3e-014 |
| Q32PZ3 Protein unc-45 homolog A | 195 | 3e-014 |
| Q15785 Mitochondrial import receptor subunit TOM34 | 192 | 7e-014 |
| Q9CYG7 Mitochondrial import receptor subunit TOM34 | 192 | 7e-014 |
| A4K2V0 Mitochondrial import receptor subunit TOM34 | 192 | 7e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LB89 At1g56090 | 933 | 1e-098 |
| B8LQC3 Putative uncharacterized protein | 642 | 7e-065 |
| B9T2A1 Heat shock protein 70 (HSP70)-interacting protein, putative | 572 | 9e-057 |
| B9H631 Predicted protein | 561 | 2e-055 |
| B9RI19 Heat shock protein 70 (HSP70)-interacting protein, putative | 556 | 6e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G56090.1 tetratricopeptide repeat (TPR)-containing protein | 937 | 2e-101 |
| AT3G25230.1 ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase | 161 | 2e-011 |
| AT3G25230.2 ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase | 161 | 2e-011 |
| AT3G17970.1 atToc64-III (Arabidopsis thaliana translocon at the outer membrane of chloroplasts 64-III); binding / carbon-nitrogen ligase, with glutamine as amido-N-donor | 153 | 2e-010 |
| AT5G09420.1 ATTOC64-V (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V); amidase/ binding / carbon-nitrogen ligase, with glutamine as amido-N-donor | 148 | 7e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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