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Information for unigene UN29486

FASTA Sequence
Unigene ID: UN29486Length: 1188 SSR 
GTCTGGTAACAATGTGAAAGCGAAGAAGAAGCTAACCAGAGACTGGAAGGAATCAAATGAGGGGAGAATGCGAGAGAAAATGGAGG
GGGAGGAGGAGGGAGGGACGGCGTCGAGGGAATCGAGGGATCTGTAGAGGACGAAGATGGAGATGGAAATGGCGGCGAGGAATATA
ACGGCTCGGCGTACGGGGCGCGAGCACGGCGTCATGGTGACGGAAGCTACGGAGGAGGAAGAATGGTTAACGTCGTGAGGCGAGAT
GGTGAGGTTCGTCGTCGACTTGAGACTCGAGGTGACACGGTGCGATAGATGATTCATCTACACCACCGACCATCGTCGGCACCGAC
GCGAAATCAAAAGGTTAATTTCGAGACTTTATTTGTTTTTTTAACGGTTAAACTTTTGTTTTTACTATTTCACCAAGAGAAATTAC
TGGAAGGTTGTCGATAAATAACCGTATAAATTACTTTCTCTTCCTTTTTTAATTTCGTCGAGTGATTTTAATCTTCCAAACATGAA
AATGAAATCAGCATATGTACTGTGCTTTATTATTGGGTTTATTATCATTTTATACTTTTTTGGCAGTAATTATTTTATGCTTTTTA
AGGTTTCACTTTCAGTTTGATATTAACGTTTAGATAAATTTTTTTTTGTGTTTCAGAAAAAAAAAAGAGTTTCAAAAAAAAAAAGA
TAAATTTTATTTTCAAGATTTCGTCCATGTGATAAACCAACAATCCTAGGAGTTTAACAACAAAATTATCTGAATCTTTTCACTGA
GGCTAAGCTAAGGAGGCAAATATTTATTTACTGAGTTTAGCTGCTCAGGAGAGAGATTGAAAGAGAAAGGTTGAGATCAATCTTTG
GTGAAGAACCAAGGCAATCTTTGAAGACCAATGGTGCAGAACAAGTGGAGACTGCTTCGCTCGTTTCACTCACTGATGATCCGTTG
CTTCTCCATTGATGATGATGATGATTCAACGACAGAGACAACGACAAATCTTCCGCTTCTTGTTCTTGCCAAGTCTTTTCTTCCTT
CTCTGTTTTCTGTTGAGACAGAAAAAAACGAAATCAGTTGCTAAACCGGACAATAACCAGATTTTGGTATCACAATTTCAATAAAA
CCGGTTGATAGTTATAAACCAAACCGCAATCCCCTAAATAAGTGAGAATATGAAGATCTGAGTTCTTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADQ43192 unknown [Eutrema parvulum]2872e-023
ADQ43193 unknown [Eutrema parvulum]2584e-020
ACQ90600 putative Myb DNA binding protein [Eutrema halophilum]2503e-019
XP_002875110 hypothetical protein ARALYDRAFT_484129 [Arabidopsis lyrata subsp. lyrata]2451e-018
NP_565281 transcription factor [Arabidopsis thaliana]2218e-016

Swiss-Prot top hits (Blast detail)Scoree value
Q700D9 Putative Myb family transcription factor At1g146002025e-015

TrEMBL top hits (Blast detail)Scoree value
C7SI18 Putative Myb DNA binding protein2502e-019
Q7X887 Putative uncharacterized protein At2g020602215e-016
C7SI19 Putative Myb DNA binding protein2181e-015

Arabidopsis top hits (Blast detail)Scoree value
AT2G02060.1 transcription factor2213e-018
AT1G14600.1 DNA binding / transcription factor2034e-016
AT1G14590.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G02061.1); Has 179 Blast hits to 175 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).1201e-006
AT3G24550.1 ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase1131e-005

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information