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Information for unigene UN29547

FASTA Sequence
Unigene ID: UN29547Length: 929 SSR 
GTACAACGGTGGGAGGCTTGTAGTGAATGAAGGTGAACATCCCAGTAAACGAAGAGTTTCTTTTAGATCAGTAGATCACGGAGGAG
AAGCATCAGTGATCAGATTTGAGGACGACGAAGAAGAAGATGATGATGATGATGAAGAAGAAGATGGAAGCAATGGAGTAGAATGG
GATGATGATGAACAGAGAGAACCAGAGATTGTTTGCCGTCACATTGATCATGTGAACATGTTAGGTCTCAACAAGACAACCTCGAG
ACTCAGGTACCTCATTAACCGGCTTGTGACTTCTCTGCTCCAGCTGAGGCTGCCTAGATCAGACCCCGGTGGAGAGCACAAGAATC
TTGTCCAAATCTATGGTCCAAAGATCAAATACGAGAGAGGATCTTCCGTGGCGTTTAACGTGAGGGATTTTAAGAGTGGGATGGTT
CATCCTGAGGTAGTGCAGAAACTAGCTGAGAGAGAAGGTATATCTCTAGGCATTGGTTACCTCAGTCATATAAAGATCGTGGATAA
TCGAGGAGGCGAAGATTCGAGTTCTTGGAAACCAGATGGAAGAAACAGCAACGGTTTCATCAGAGTTGAGGTTGTCACTGCTTCAC
TTGGGTTCTTGACGAACTTTGAAGATGTTTACAGATTATGGAGTTTCGTGGCGAAGTTCTTGAGTCCGGGTTTTGCTAAACAGGGG
ACACTCCCAACAGTTGTTGAAGAAGATGACTCTTCAGAAACTTAGAAGAAGAAGAAATTGAGCAATGAATACATTTTGTTTTTGGC
TACACTTCCTTTTACTGTACTTATCGGAGAACATTCTCATTGTATGAGTCTGGCAAGTTTATGTGAACAGAGACGATCTCAGACAA
GTTTACTGCATATTGTAACTGTTCATTTATTTTGTGTCTTTGTTTCACACAATTCATTGATTCATATCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201496 catalytic/ pyridoxal phosphate binding protein [Arabidopsis thaliana]10551e-112
XP_002866724 hypothetical protein ARALYDRAFT_496904 [Arabidopsis lyrata subsp. lyrata]10423e-111
NP_195427 catalytic/ pyridoxal phosphate binding protein [Arabidopsis thaliana]6812e-069
XP_002869008 hypothetical protein ARALYDRAFT_912653 [Arabidopsis lyrata subsp. lyrata]6769e-069
XP_002310171 predicted protein [Populus trichocarpa]6704e-068

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FGD5 Emb|CAB16785.110557e-113
O23176 Putative uncharacterized protein AT4g371006812e-069
B9HEF2 Predicted protein6703e-068
A5AMA2 Putative uncharacterized protein6561e-066
C5WZA1 Putative uncharacterized protein Sb01g0070605852e-058

Arabidopsis top hits (Blast detail)Scoree value
AT5G66950.1 catalytic/ pyridoxal phosphate binding10563e-115
AT4G37100.1 catalytic/ pyridoxal phosphate binding6819e-072
AT2G23520.1 catalytic/ pyridoxal phosphate binding6657e-070
AT5G51920.1 catalytic/ pyridoxal phosphate binding2902e-026
AT4G22980.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: catalytic/ pyridoxal phosphate binding (TAIR:AT5G51920.1); Has 294 Blast hits to 268 proteins in 91 species: Archae - 4; Bacteria - 15; Metazoa - 79; Fungi - 66; Plants - 107; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).1602e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information