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Information for unigene UN29617

FASTA Sequence
Unigene ID: UN29617Length: 1526 SSR 
CCAGAAAAGCAAACTGGCAAGTCAAGATATCATCCTTCAGAAGATATTAGAGCCTCTCTTCCACAAAATACTGGAGATTCCAGGCT
TTCCCCTGCAGAAACTACTAGAACCATCATTGAGTGTGTCGTCATGTTCAGGTGAACAATAAAGGAACCCTGATGCTTACTGGTTC
AACTGGTGATGGAGTTCTTGAGAATATTCTCTGGCCAGACATACCTTATATAACTGATCAGAATGGAAATTTATACTTTCAAGTTA
AGGAGGATGAGGACGTCATGCAGTCTGTTACCTCTGAAAATAACTATGTGCAAGTAATAGTAGGTTTTGATACGATGGAGATGATC
AAGGAAATGGAGCTGATGGGTCTATCTGATAGTGATTTCGAAACTGAAGATGATGAAAGTGGAGGAGAAGATGATAGTGAGGAAGA
TGGGGATGAAGGAGAAGACGATGAGGAGGAATGGGTTGCTGTTCTAGAGGATGAAGATGAAGACGAAGATGATGATGATGAGGATG
ACTATGATGATGATGATGATGAAGATGAAGATGACGACCAATCGCTTGGTGACTGGGCAAAACTGGAAACAATGAGGAGCTGTCAT
CCCATGTTTTTTGCAAAGAGAATGTCCGAGGTGGCATCAAATGATCCTGTAGATTGGATGGATCAGCCGTCTGCTGGCCTTGCCAT
CCAGGGACTGTTGAGTCATATCTTAGTGGAAGATTATTCAGATATCCAACAGAAACTTGCTGACATAAAACCTACAAGTACCAGGG
GAGACAAGAATGCTGAAGAGACTGAGAAGGCAGATGGTGATGATGAATCTGAGAAGCCGAGAAAAGTGGTGGCGTTTTACAAGCTG
GAGATGATAAGAGTTCAACTTATTACAGTGCAAGGGGATCAGACCGAAGTTGAAGTGGAAGATGTGAGAAAAGCACAACCTGATGT
TATTGCTCATGGATCAGCTGGAATCATAAACCGTTTACAAGAAGCTGGTGATAAACTAGCTGAAGCACTTAGATCTTTGTGTTGGA
GATACTACGGTATTCAAGCAGAGGAAGTGAAGCTGATAGGGTTAGATTCCCTTGGTTTTGACCTCAGGCTTTGCGCAGGAGCAAAG
ATTGAGTCATTGCGGTTTGCATTCTCGACACGGGCAACATCAGAAGATGACGCAGAGGAACAAATAAAAGAACTATTATTCCCGAC
AAGAGACCCGTCGAAGCCACTGGGAAAAAGTCAGAAGGAGTCTTCTTAGTGCTCTCTAGTGATCTTTTAATGAAAGCTACTAGGAG
GAAACAGTAATCCAAACTGCAAATGCATTGTCTGTGGGACAAACATGAACAAGGGTGGGTTGAAGCATTCAATTGATTTTCGAGGC
TGTAATTGTGGTTTCTAGTTTTCTTTTTTTGGGTTTACTTTGCACAAATTGAGCACTCTAGTTTCAACTCATTCGTTAGCAAAGCT
ATTGCATCAAAATTGACATAGCTCAAAATAAATCCTTCTTAAAACTGTCAGGACAAATCTCTAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877651 hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp. lyrata]14881e-162
BAF01615 hypothetical protein [Arabidopsis thaliana]14826e-162
NP_190483 pentatricopeptide repeat-containing protein [Arabidopsis thaliana]14826e-162
CAB61996 putative protein [Arabidopsis thaliana]14567e-159
BAB08729 unnamed protein product [Arabidopsis thaliana]11833e-127

Swiss-Prot top hits (Blast detail)Scoree value
Q0WMN5 Uncharacterized protein At3g4913514823e-163
Q75JC9 Uncharacterized protein DDB_G02716701973e-014

TrEMBL top hits (Blast detail)Scoree value
Q9FLV6 Emb|CAB61996.111832e-127
B9RIS0 Putative uncharacterized protein9629e-102
B9GB31 Putative uncharacterized protein7111e-072
Q2R2Z9 Expressed protein7111e-072
B9H3M6 Predicted protein5211e-050

Arabidopsis top hits (Blast detail)Scoree value
AT3G49140.1 EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2758 (embryo defective 2758) (TAIR:AT4G33990.1); Has 45368 Blast hits to 16108 proteins in 635 species: Archae - 60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499; Plants - 14806; Viruses - 492; Other Eukaryotes - 7967 (source: NCBI BLink).14562e-161
AT5G24060.1 unknown protein11831e-129
AT3G59300.1 unknown protein3496e-033
AT3G49140.2 EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2758 (embryo defective 2758) (TAIR:AT4G33990.1).2941e-026
AT5G63740.1 zinc finger protein-related1766e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
112  67%

Unigene MembersMember information