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Information for unigene UN29714

FASTA Sequence
Unigene ID: UN29714Length: 1164 SSR 
GGAGCTAAGAAAGAAAGAAAGGAAAAAAGAAAGAAGGTGGTGGAAGCAGATAACATGTCTGCGATTGTTTGCGGTAGCAAGAGATC
TCTGTTCGAGGATTTGTCCGCCGCTTCTTCTTCTTCTTCTTCTTCGCCTCCCGTCTCCAAGAAACTCCGTTGCTTTTCTTCCTCTT
CTCCCCCTCGTTTCCCCCCTCCTCCTGCCTCCTCCTCCTCGCTCCTTCTCAATCATCTCGCTGCGATTTTCCCCGATATGGATCAT
CAGATTCTTGAGAGGGCAATTGAGGAATGTGGAGATGATATTGATTCTGCGATTAGATGTTTGAATCAGCTTCGTTTAGAATCAAC
CAATAAGAACTCAGAATCATCTATCCAGGGGGAAGCAAAAGTGGAAGCTCCTCAGCAGCAGCAGCAGCAGCAGCAGCAAGGGGAGG
AGGAAGTCTTGAACATGGATGGCGCTGAGTGGGTTGACCTCTTCGTCAGGGAGATGATGAATGCTTCAGACATGAAAGACGCGAAA
GACCGCGCTGCAAGAGCGTTAGAAGCTTTGGAGAAGTCGATCAAGGCACGTGCTGGTGGTGCCGACGCAGCGGCGGCGGCGGCGGC
GCAGAGCAGCAGTCTCCAGCAGGAGAACTCGATGCTGAGGCAGCAGTTGGAAGCTATCGTCCAGGAGAACAGTTTGCTGAAACGAG
CGGTGGTGACGCAGCAGAAGCGGCAGAGAGAGAGTGAAGATCAAAGCCAGGAGCTGCAGCATCTGAGGCAGATGGTCACTCAGTAC
CAGGAGCAGCTGAGGACTCTCGAGGTGAATAACTATGCTCTCACGCTTCATCTGAAACAAGCGCAGCAGAACAACGGTTCGATCCC
GGGACGGTTTCATCCTGACGTGTTCTAATGCGGCTTTTGTCGCTCAAGAGGAATGCTCAGTCAAGACGTATATCTAATTTCAGTTT
CCAGTGTTTGTTGTATGTTTCTTCTTCTTCTTCTTCTTCTCCGTTGGCTTGTGACTTATCTTTATTATACATGAATTATGGGATGA
TTGATGAATCTGTCCGAAGCAGCTGTATTTTCAGACAAGACTTTGAGACATACTTGTTTTGTAAAGTTACAAATGTACATATATGT
ATCATTTAATCTACTAGTATGAGTATATAAAAGTTGAGTTGGATTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAK43955 unknown protein [Arabidopsis thaliana]9663e-102
NP_568521 Ubiquitin system component Cue protein [Arabidopsis thaliana]9654e-102
NP_001190418 Ubiquitin system component Cue protein [Arabidopsis thaliana]9592e-101
XP_002868389 hypothetical protein ARALYDRAFT_493566 [Arabidopsis lyrata subsp. lyrata]9313e-098
XP_002308974 predicted protein [Populus trichocarpa]7352e-075

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94K99 Putative uncharacterized protein At5g324409662e-102
Q8H1Q3 Putative uncharacterized protein At5g324409653e-102
B9HA90 Predicted protein (Fragment)7351e-075
B9SME8 Putative uncharacterized protein7063e-072
A9NV65 Putative uncharacterized protein5916e-059

Arabidopsis top hits (Blast detail)Scoree value
AT5G32440.1 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).9794e-106
AT5G32440.2 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5852e-060
AT1G80040.1 unknown protein4014e-039
AT5G02510.1 unknown protein2062e-016
AT1G80040.2 unknown protein1381e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information