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Information for unigene UN29781
| FASTA Sequence |
| Unigene ID: UN29781 | Length: 902 |
SSR | | GTCTAATGGCCTTGATGAGTTCCGGACCAATAGATACTCCTCTTTTGATTTCATTATCGCTGAAAGGAGTGATTCCTTTTCTTTCG
AACTCCATCTGAATGTGACTTAGAAAGTGTTTGCGTACATCTTCCCCGCGGAAGCTTGGAAAGACATCATGCGTCCAGATGTGAGA
AGAAGAAGAAGAAGATGGATGAACCGTTGAAGGAGACAAAGAAGATGAAGGCGATGAAGAAGAAGGATCCTTTTCTCTGTTATCTT
CTTGATGGAGTCTAAGTTTTCTCATCAGAAGAGTTAAGAGACCTATTGCAGCAGCAACAATGGTAAGAAAAAAAGAAGAATCCATT
AATGGTATGATGAAAAGAGGATCAATATTTTAGAGCTATATAGAGGGAGCCTATGAGGCCTTGTATAACATTGAACACAGAACGTT
GACAGGGAATGTTAAACTACTAGCAATAAAAAAGTGGACTGGCTGGCTGGTGCTTTTCTTCGTATATATCTACTTCCTTTAATTTT
CCTCACAGAAAATTAAAATAACGACAGTAACAGTGGTAACAGAGAGGTCCTACAAGCGCAGCCAGCAAGAGCAGAAGCTTCTAAAT
AATGATATCCGAGAAAAAATACACAAGCAACTCTCAAATATATAGAAATAAAGAATCAGAAAGCACAAACATCAACCCTTTTTGTT
TGTTTGTAAGAAAACAGTAAAAAGGAAGGAACGTAAGAATCATACAAACACAGCAATCTTTCAAGAAAGCAGTGATCAAAAGCAAT
GTCGAGAGAAAAGTCTTTAATCAAGTATTCGAAATCGTAAGGCATAGTAATCAAAAATCATATATCATACAACAAAAATAACATTT
GAACTATAAAATGATATCCAAGAAATAGCACAACCAACTCAC
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| GenBank top hits (Blast detail) | Score | e value |
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| ACP30571 disease resistance protein [Brassica rapa subsp. pekinensis] | 446 | 4e-042 |
| ACP30572 disease resistance protein [Brassica rapa subsp. pekinensis] | 446 | 4e-042 |
| ACP30577 disease resistance protein [Brassica rapa subsp. pekinensis] | 420 | 4e-039 |
| XP_002863117 predicted protein [Arabidopsis lyrata subsp. lyrata] | 386 | 4e-035 |
| XP_002863119 predicted protein [Arabidopsis lyrata subsp. lyrata] | 383 | 8e-035 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82500 Putative disease resistance protein At4g11170 | 193 | 4e-014 |
| Q40392 TMV resistance protein N | 140 | 5e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D1GEC9 Disease resistance protein | 446 | 3e-042 |
| D1GED0 Disease resistance protein | 446 | 3e-042 |
| D1GED5 Disease resistance protein | 420 | 3e-039 |
| Q9LFN1 RPP1 disease resistance protein-like | 372 | 1e-033 |
| Q9M8X8 Putative disease resistance protein | 298 | 4e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G11250.1 disease resistance protein (TIR-NBS-LRR class), putative | 372 | 6e-036 |
| AT3G04220.1 disease resistance protein (TIR-NBS-LRR class), putative | 298 | 2e-027 |
| AT1G69550.1 disease resistance protein (TIR-NBS class), putative | 283 | 1e-025 |
| AT3G25510.1 disease resistance protein (TIR-NBS-LRR class), putative | 260 | 6e-023 |
| AT1G65850.1 disease resistance protein (TIR-NBS-LRR class), putative | 250 | 9e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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