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Information for unigene UN29784

FASTA Sequence
Unigene ID: UN29784Length: 741 SSR 
GGAGGTGCGATCTCTCTCTCTCCCACTCTCTTCTTAAAGATATGACGGTGATGAATCCCTCCTTGTGTATCGATACACAACCATTC
GTCTACCTCCCTCCTCTCTCTTCTCATTTTGGGAAATTCGATGGGCGTTACTATCCTCCTACTGGAGTTCCTATGCAATCCCATAG
CCAGATTAAATCTCCTTCTCTCAAGGCAGTTGCAAGTACAGGAGGAGCCTTTTCTACCAAAGGATTTGGTTTCGGTTCTAAGAGCA
AAACATCTGTCTTTGCATGTAACGCTGCCCTGAATGCAAAGTGCAGTCAAGGGCAAACGCAGACTGTTACTCGGGAATCACCAACC
ACCACACTAGCTCCTACTCATGGAAAGGAGAAATCCCCAAAGCTTGATGATGGTGGAAGCGGGTTCCCACCTCGTGATGATGGTGG
TGGTGGCGGCGGTGGAGGAGGTGGAGAGAGCTTCTCTGGTGGATTCTTCCTTTTCGGGTTTCTTATGTTCATGGGTTACTTGAAAG
ATTTGGAGGGCGAACATGAAAGCAGCCACTAGAGAGAGAGAGGGGAGGAGGGAACAACGATACATGATCATCTCACCAACAGACAA
ATTATTCAAAACAGATAATAATAAAGTATCTACTAGTGCTCTAGCAATTAGGCAACACATTTGTATGTTTCATCGATTTCTGATTA
TGAATCAGACAGAATTTTTGTTATCTCAGGCATAATACAAATGTTCAAAGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893626 hypothetical protein ARALYDRAFT_473274 [Arabidopsis lyrata subsp. lyrata]5583e-055
NP_973941 uncharacterized protein [Arabidopsis thaliana]5378e-053
NP_001077630 uncharacterized protein [Arabidopsis thaliana]5118e-050
AAF19750 F26G16.9 [Arabidopsis thaliana]4947e-048
NP_564712 embryo defective 1303 protein [Arabidopsis thaliana]3872e-035

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A8MQH6 AT1G30475 protein5375e-053
Q6NM15 At1g304755116e-050
Q9S9Q2 F26G16.94945e-048
A8MS46 Uncharacterized protein At1g56200.23871e-035
Q9C7J5 At1g56200/F14G9_263871e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G30475.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: emb1303 (embryo defective 1303) (TAIR:AT1G56200.1); Has 127 Blast hits to 127 proteins in 31 species: Archae - 0; Bacteria - 14; Metazoa - 65; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).5383e-055
AT1G30475.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: emb1303 (embryo defective 1303) (TAIR:AT1G56200.1); Has 121 Blast hits to 121 proteins in 30 species: Archae - 0; Bacteria - 14; Metazoa - 59; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).5123e-052
AT1G30475.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: emb1303 (embryo defective 1303) (TAIR:AT1G56200.1); Has 121 Blast hits to 121 proteins in 30 species: Archae - 0; Bacteria - 14; Metazoa - 59; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).5123e-052
AT1G56200.1 emb1303 (embryo defective 1303)3878e-038
AT1G56200.2 emb1303 (embryo defective 1303)3878e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information