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Information for unigene UN29809

FASTA Sequence
Unigene ID: UN29809Length: 1593 SSR 
CTTCCCCTAATCCTCCACCCAAATGATGTTTAAGCCTTTGATCTACGACTCCTCCTCCTCCTCAACCACCCTCCTCGATGGCGACG
ACCACTCCGTCAAGCCTCTCCTCTCCCGCGCCTCCAGCTTCAACGGCGCCGTCACGTCGCCTAACGGTGAATCGACCGGTCTGTAT
CAGAACAGACGCCGACGATCCAACAGCGATAACTGTCTCTCTGCTGCGGCCTCTCCGGATCATGATGGTACTACTAACGGAAGCCA
ACAACAAACTATCGGTCAGGAGGTTAGCCACGCAGCCGCCGAGACTTTCTTGCTCACTCGTCTCTTCTTGAAGCTCCTTAGCTATC
TTGGGTTATAGATGGATCACAAGGTTTCTCGCACTTGGTTTCTATGCTTTTCTGCTTATGCCAGGCTTTATTCAAGTCGGGTATTA
CTATTTCTTCTCTCCTCACGTCCGCCGAAGTATTGTTTACGGTGATCAACCAAGAAACAGGTCATCATCTTTTACTAGTTATTCTT
TCTAGAGCCTAGTAGATGCTTTGATGTTATCTTCTTTATTTAAGTTGGTTTCTTCAGGCTTGACTTGTATCTACCTAAGAACACCA
ACGGTCCAAAACCTGTTGTGGCGTTTGTCACTGGTGGAGCCTGGATTATTGGAATGTCTTGTGTTTGATTCAGTTATAAGGCGTGG
GGTTCTCTTTTAGGACAGCAGTTATCAGAAAGAGATATTATTGTCGCTTGTATCGATTACAGGAATTTTCCTCAGGGATCTATTAG
TGACATGGTGAAAGATGCTTCTTCTGGCATCTCTTTTATTTGTAATCATATCGCTGAGTATGGTGGTGATCCAAACCGAGTTTACC
TGATGGGTCAGTCTGCTGGTGCACATATCGCGGCTTACGCCCTGGTAGACCAGGTGGTTAAAGAGTCAGGGGAGGGGGACAGTGTT
TCTTGGAGTAGTTCACAGATAAATGCTTATTTTGGTCTGTCTGGAGGGTACAACCTTTTGAGCCTTGTAGACCACTTCCATAACAG
AGGACTGTACCGTTCCATCTTTCTGAGCATCATGGAAGGAGAAGAATCACTAAAACAGTTTTCTCCTGAACTAGTAGTGCAAGACC
CAAATCTCAAACACATTGTTTCTCGCCTCCCACCTATTATTCTGTTCCATGGTACTGCTGACTACTCCATCCCTTCAGATGCAAGT
AAATGTTTTGCGGAAACCCTCCAGAGGCTCGGAGGGAAAGCAGAAGCGATCCTTTACGAGGGGAAAACACACACGGATTTGTTTCT
TCAGGATCCAATGAGAGGTGGAAAAGACGAGATGTTTGAAGACATAGTATCAGTGGTTATGGGAGACAATCAAGAAGTGATTGGTA
AAAGCGTAGACAGAAGGCGTCTTGTCCCTGAATTCATGTTGAAGTTGGCTCACTGGGTCAGTCCGTTCTAACTCTCACTCTCTTCT
GCTCCCCAAAAAACAACTATTACCCTGTATAGTAGTAGTACTTAACAAGGAGACGGATTCATTATACTTTTGACTATACGGATGAT
TTTGAACTTTGATCATGAAATTGTATCCCAGTTTGCATTACACGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890677 hypothetical protein ARALYDRAFT_472805 [Arabidopsis lyrata subsp. lyrata]13761e-149
AAG50528 hypothetical protein [Arabidopsis thaliana]13511e-146
NP_173937 Esterase/lipase domain-containing protein [Arabidopsis thaliana]13511e-146
XP_002315969 predicted protein [Populus trichocarpa]11914e-128
XP_002277990 PREDICTED: hypothetical protein [Vitis vinifera]11762e-126

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8VYP9 Putative uncharacterized protein At1g2612013517e-147
Q9C556 Putative uncharacterized protein F14G11.913517e-147
B9HWP2 Predicted protein11913e-128
B9RL97 Catalytic, putative11591e-124
B9H3R6 Predicted protein (Fragment)10792e-115

Arabidopsis top hits (Blast detail)Scoree value
AT1G26120.1 esterase-related13523e-149
AT5G15860.1 ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase10512e-114
AT3G02410.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase, type B (InterPro:IPR002018); BEST Arabidopsis thaliana protein match is: ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 6563 Blast hits to 6539 proteins in 837 species: Archae - 25; Bacteria - 2499; Metazoa - 2507; Fungi - 392; Plants - 105; Viruses - 5; Other Eukaryotes - 1030 (source: NCBI BLink).10271e-111
AT3G02410.2 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase, type B (InterPro:IPR002018); BEST Arabidopsis thaliana protein match is: ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 6626 Blast hits to 6602 proteins in 841 species: Archae - 25; Bacteria - 2529; Metazoa - 2527; Fungi - 403; Plants - 105; Viruses - 5; Other Eukaryotes - 1032 (source: NCBI BLink).10271e-111
AT5G15860.2 ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase5485e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  50%
 
91  50%

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