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Information for unigene UN29831
| FASTA Sequence |
| Unigene ID: UN29831 | Length: 799 |
SSR | | TTTTTCTCAGACGCATACAAGTGATGTGATACAGTACCAAGGCGGCTCGTTCGTTTAACAAGAGTGTTCGTTTCTCCAACAACTTT
GGTCTATTGCTTGCTTAGAAGTAACGTTTTTGTATCATTCTTGAAATTTTCGGGAATTTAAGAACCAAAAGAATCATGTCTTGGAT
CAAGAACCTCGTAAGGATCTCTCAGACAACTTCTTCTGTCGGAAACTTGTTCAGAAACGACGAATCCTACACTCTCTCGTCTCGTT
TCTGCACGGCTCTGCAACATAAGCAGCAACAACAGAGCGAGATGGTTCAAGCAACGGAGGTCGTTAATGGGTTTGAGAAACAACAA
CAACAACATTGTTACGAAGGTTTGGCTCCGACCAAAGAAGGAGAGAAGCCGAGACTGCTGGTTCTAGGGTCGGGTTGGGCAGGTTG
TCGTCTTATGAAAGGAATCGATACGAGCATTTACGACGTCGTTTGCGTCTCTCCTAGGAACCACATGGTCTTCACTCCTCTCTTGG
CTTCTACTTGCGTCGGTACGCTTGAGTTTAGGTCCGTTGCAGAACCAATTTCTCGTATCCTACCGGCTATTTCACGTGAACCTGGT
TCTTATTACTTCCTCGCTAATTGCTCAGGACTTGATTCTCAAAACCATGAGGTGCATTGTGAGACAGTAACTGATGCGTTAAGCAC
AGTGAAGCCGTGGAAGTTCAAGATCGCTTATGACAAACTTGTACTAGCTTGCGGTGCAGAGGCATCCACATTTGGGATTAACGGCG
TCTTAGAAAACGCCATCTTCCTCCG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002889635 hypothetical protein ARALYDRAFT_887930 [Arabidopsis lyrata subsp. lyrata] | 896 | 2e-094 |
| NP_563783 alternative NAD(P)H dehydrogenase 1 [Arabidopsis thaliana] | 878 | 3e-092 |
| AAF82202 Strong similarity to an unknown protein F23F1.9 gi|7432659 from Arabidopsis thaliana BAC F23F1 gb|AC004680. It contains a pyridine nucleotide-disulphide oxidoreductase domain PF|00070. EST gb|AI997290 comes from this gene | 878 | 3e-092 |
| AAM61225 putative NADH dehydrogenase (ubiquinone oxidoreductase) [Arabidopsis thaliana] | 878 | 3e-092 |
| NP_180560 NADH dehydrogenase [Arabidopsis thaliana] | 725 | 1e-074 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q07500 External NADH-ubiquinone oxidoreductase 2, mitochondrial | 242 | 7e-020 |
| P40215 External NADH-ubiquinone oxidoreductase 1, mitochondrial | 240 | 1e-019 |
| O14121 Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial | 236 | 3e-019 |
| O43090 Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial | 226 | 5e-018 |
| P32340 Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 218 | 4e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GWA1 Putative uncharacterized protein At1g07180 | 878 | 2e-092 |
| Q8L5V3 Putative NADH dehydrogenase (Ubiquinone oxidoreductase) | 878 | 2e-092 |
| Q9LML0 F10K1.11 protein | 878 | 2e-092 |
| O80874 Putative NADH dehydrogenase (Ubiquinone oxidoreductase) | 725 | 1e-074 |
| A9PHN0 Putative uncharacterized protein | 631 | 8e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G07180.1 NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1); NADH dehydrogenase | 896 | 9e-097 |
| AT2G29990.1 NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2); FAD binding / NADH dehydrogenase/ oxidoreductase | 768 | 6e-082 |
| AT4G28220.1 NDB1 (NAD(P)H dehydrogenase B1); NADH dehydrogenase/ disulfide oxidoreductase | 257 | 1e-022 |
| AT4G05020.1 NDB2 (NAD(P)H dehydrogenase B2); FAD binding / disulfide oxidoreductase/ oxidoreductase | 254 | 2e-022 |
| AT2G20800.1 NDB4 (NAD(P)H dehydrogenase B4); NADH dehydrogenase | 249 | 9e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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