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Information for unigene UN29832
| FASTA Sequence |
| Unigene ID: UN29832 | Length: 1369 |
SSR | | GCTTCTTCTTTAATTCAAAATTCAAAAACTTTATCGGAGACTCGAGAGAGGTTATGGTGAAGTCATCGGAGGGTGTTTCGTCTTCG
TCAGTGGCGCCGTTCCTGAGGAAATGCTACGAGATGGTCGACGACTCTTCCACTGATTCCATCATCTCGTGGAGTGCTAATGGAGA
CGACAACAGCTTCGTTATCTCGGACACGACCCTCTTCTCTGCTCAACTCTTGCCTAAATACTTTAAACACAGCAATCTCTCTAGCT
TCGTCCGTCAGCTCAACATCTACGGTTTTAGAAAAGTTGATGCTGATCATTATGAGTTTACGAACCACTGGTTTGTCAGAGGTCGA
AAGGACTTGCTAAAGAATGTTATCAGGAGGAAGAATGTTCAGAGTAGTAGTGAGGATCAGCGCAAAAGCGTTTCCGAAAAACAGGA
AAGTACAAGTGAAACTTGTCAGGGTGGTGATCCTGAGAAGAGTGAGCTGTGGAAAGAAGTTGAAATCTTAAAAGGGGATAAGAAGG
CATTGGCGCAGGAGCTTGTCAAAGTTAGGCAGTACCAGGAGGTTACTGACACGAAGATGCTTCACTTGGAAGACAGAGTTCAAGGA
ATGGAAGAGAGTCAGCAGGAGATGCTTTCGTTTCTGGTTATGGTTATGCAGAATCCAAGTCTGTTGGTTCAGTTGCTTCAACCAAA
GGAGAAGAATTGGAGAAAAGGTGAAGGAGGAGGAGGAGGAGCAACGATTCTGGAAGAAGTTACAGAGGAAGGAGAATCAAGCTCTA
ATGGTCTTCCTGTAGTAACATACCAGCAGAGACCATCAGAGGGAACAGCAAAGTCAAGCTCGAGTGACTTGAATGATTTTTTGAGA
AACGCGGATATGTTGAAGTTCTGCTTGGATGAGAATCATGTGCCCTTGATCATACCTGATCTGTATGATGGTGGGGCGTGGGAAAA
GCTTTTGTTGTCGAGCCCTTCAAAGAAGAAGAAGAATGTGAAGAAAGGTAAGGATGATGGGACATTGGAGGAGGAGGAGGAGTGTG
AGCCGATGGAGTTAGACAAGAGCGGTACGTTGAAGCTGATACAAGAGGAGATGGAGAGAGCAGATGAGTTTGATTCTGGACAGCTT
ACTCCAGAGAGGTCTAGGAATCTTGAGATTCTAACACAGCAGATAGCATTGATGGCTTCAAATGAATAGAAAGAGAAAATGATGAG
TTTTTGAACATATCAAAACTTTTGTTAGGTAGTGAAAACATTATAAGTAGGCTCTGGAGTATTATTTTTGACCAGAGCTATTCTTA
AAGATATGCTTTAGGAGTTTAGGGTCTTGCTAAAGAAAACCTGGACTTTCTATCTACTGAGAAGTTTACTTTATACTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887161 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1379 | 5e-150 |
| NP_176964 heat stress transcription factor A-8 [Arabidopsis thaliana] | 943 | 2e-099 |
| XP_002315847 predicted protein [Populus trichocarpa] | 785 | 4e-081 |
| XP_002311537 predicted protein [Populus trichocarpa] | 719 | 2e-073 |
| CBI26811 unnamed protein product [Vitis vinifera] | 679 | 7e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7U5 Heat stress transcription factor A-8 | 1379 | 2e-151 |
| P41151 Heat stress transcription factor A-1a | 483 | 2e-047 |
| O81821 Heat stress transcription factor A-1b | 478 | 6e-047 |
| Q9LQM7 Heat stress transcription factor A-1d | 471 | 4e-046 |
| Q84T61 Heat stress transcription factor A-1 | 468 | 9e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PGC3 Predicted protein | 785 | 3e-081 |
| B9HJI4 Predicted protein | 719 | 1e-073 |
| B9SNF4 Heat shock factor protein, putative | 674 | 2e-068 |
| C6T277 Putative uncharacterized protein (Fragment) | 612 | 3e-061 |
| Q25BL9 Heat shock factor, putative | 471 | 6e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G67970.1 AT-HSFA8; DNA binding / transcription factor | 1380 | 1e-152 |
| AT4G17750.1 HSF1 (HEAT SHOCK FACTOR 1); DNA binding / protein binding / transcription factor | 483 | 1e-048 |
| AT5G16820.1 HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor | 478 | 5e-048 |
| AT5G16820.2 HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor | 478 | 5e-048 |
| AT1G32330.1 ATHSFA1D; DNA binding / transcription factor | 471 | 4e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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