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Information for unigene UN29903
| FASTA Sequence |
| Unigene ID: UN29903 | Length: 805 |
SSR | | GGGTTTCAAGATGCAGACGACCAACGGCTCAGATTCATCGTTAGCAACTCCCGGAGCGACGACGCCTCCGCCGCCTCAGCAGTGGC
AACAACAACAACAACAACAGCAACATTGATGGCGGCCATGCAGTATCCAGGCGCAGCGGCTATGATGATGATGCAGCAACAACAGA
TGATGATGTATCCTCACCAATACGTTCCTTACAATTATCAGCAGCAGCAGCAACATCCTCACTTCCAATACGCGTCGTATCAACAG
CAACACAAGACACATGAGCGTGGATCTGGAGATGATGTGAAGACTCTATGGATTGGTGATCTTCTTTATTGGATGGACGAGACATA
TCTCCACAACTGCTTTTCTCACACCGGCGAGGTTTCTTCTGTGAAAGTGATTCGTAACAAGCTAACATGTCAATCAGAAGGCTATG
GTTTTGTTGAGTTTCTTTCGGGAGCTACAGCTGAAGAGGTTCTTCAGAACTTTAACGGTTCAGTAATGCCAAACTCCGAGCAGCTT
TTCCGTCTAAACTGGGCATCTTTTAGCACCGGTGAGAAGAGAGCAGTTGAGAATGGTCCAGAGCTATCGATATTCGTTGGAGATCT
GTCTCCAGATGTGACTGACACTTTATTGCAAGAGCTCTTTGTCGAGAGATATCCATCTGTCAAGAGCGCTAAAGTTGTGATCGACT
CCACACCGGCCGGTCTAAAGTTATGGTTTTGTTAGTTTGGTGATGAGACGAGAGATCAAGGCTTTGACGAGATGATGGAGCTATGT
CACAGCAGATGCGTGTAGTGTGCGACCCTAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB02953 DNA/RNA binding protein-like [Arabidopsis thaliana] | 841 | 5e-088 |
| NP_188544 RNA-binding protein 47B [Arabidopsis thaliana] | 841 | 5e-088 |
| AAM67293 nuclear acid binding protein, putative [Arabidopsis thaliana] | 828 | 2e-086 |
| XP_002885294 RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata] | 823 | 6e-086 |
| NP_175383 RNA-binding protein 47A [Arabidopsis thaliana] | 771 | 7e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q1RMJ7 tRNA selenocysteine 1-associated protein 1 | 296 | 4e-026 |
| Q9NX07 tRNA selenocysteine 1-associated protein 1 | 296 | 4e-026 |
| Q9QZI7 tRNA selenocysteine 1-associated protein 1 | 296 | 4e-026 |
| Q80VC6 tRNA selenocysteine 1-associated protein 1 | 295 | 5e-026 |
| Q5R462 tRNA selenocysteine 1-associated protein 1 | 292 | 1e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WW84 At3g19130 | 841 | 4e-088 |
| Q9LJL7 DNA/RNA binding protein-like | 841 | 4e-088 |
| Q8LFI9 Nuclear acid binding protein, putative | 828 | 1e-086 |
| Q9FX88 Putative RNA binding protein | 771 | 5e-080 |
| B9N4W3 Predicted protein | 639 | 9e-065 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19130.1 ATRBP47B (RNA-binding protein 47B); RNA binding | 841 | 2e-090 |
| AT1G49600.1 ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a); RNA binding | 771 | 3e-082 |
| AT1G47490.2 ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C); RNA binding | 505 | 2e-051 |
| AT1G47490.1 ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C); RNA binding | 505 | 2e-051 |
| AT1G47500.1 ATRBP47C' (RNA-binding protein 47C'); RNA binding | 499 | 1e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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