Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN29949

FASTA Sequence
Unigene ID: UN29949Length: 768 SSR 
GGAAAACAGCTCCCTCTCTCTCTCTCTTTCTTGTTTCAAAGTCTCTTCCTTTTTGGGCGTGTCTTCAGGAAAATTTGGATTTTTCT
GTTTTAGGGACGTTTCTTTGTTTCTTGTACTTGTGGGTTTTGTTTCTACTTGCTGCTGGTTGTCACGCTTTTTCTTCTAACTAACT
GTGAAAGCTTGTGACGACCGTATTATTATTAAAGTCTCTGTTTTGTTCTATTGTTTAAGTGATGGCTACTGAGGAGAAGCCTCTTG
ATTCAAGCCATGGTGATTCTGCCACTTCTTCAAATAAGAAGTCAGAAGGATCATCTGCTATAACAGAAGAGACTTCTACAAATGTT
CAACAATGGAGGAGAAAGAACTTATCTTTGCAGATACCCACCAGAGCAACTGGTCTCTCCCCTGAAGACTCAGTTGTAATCAGAAT
GCCTCCAACTCCTAGTCCAACTCCAAGGAGAGTGAACTTCTCTTTGACTTCAGCTTCTCCTGGTCCTGCTTCTGCTACTGCCCATC
CACGAGGAAAATCTTCTCTGGAGAATCTGATCCCAAAAGTTGGTTTCAAACCAAAAACCTCTCATACCGATATCGAAAAGGGACAA
GGGGATGTCTCTTCTCCTTCTGAATTGCAGGAGAAGGCTTCAATATCCAGGTCATTATCACTATCAAAGCTGTTTACGCCTAGGAT
CAAGAGAACTTCTTCTCTTCCTGTGACTCCCATTGTTCTTTCAAAGTCAGAGTCAGCTCACGGAGGAGCAGTGCTACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864692 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6972e-071
NP_568923 RING/U-box domain-containing protein [Arabidopsis thaliana]6831e-069
NP_851232 RING/U-box domain-containing protein [Arabidopsis thaliana]6831e-069
AAK32917 AT5g60580/muf9_230 [Arabidopsis thaliana]6831e-069
XP_002314269 predicted protein [Populus trichocarpa]3952e-036

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3E882 Putative uncharacterized protein At5g60580.26837e-070
Q9ASR2 AT5g60580/muf9_2306837e-070
Q9FKI9 Emb|CAB86085.16837e-070
B9HQ98 Predicted protein3952e-036
B9SWB9 Protein binding protein, putative3728e-034

Arabidopsis top hits (Blast detail)Scoree value
AT5G60580.1 zinc finger (C3HC4-type RING finger) family protein6834e-072
AT5G60580.2 zinc finger (C3HC4-type RING finger) family protein6834e-072
AT5G60580.3 zinc finger (C3HC4-type RING finger) family protein6834e-072
AT5G60580.4 zinc finger (C3HC4-type RING finger) family protein6834e-072
AT3G09760.1 zinc finger (C3HC4-type RING finger) family protein1638e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
81  50%

Unigene MembersMember information