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Information for unigene UN30247

FASTA Sequence
Unigene ID: UN30247Length: 912 SSR 
GGACAATCGGTGGTCTCTCTCTGCTCTTCAAATCATCCCCTTCCTCCTCCTCCTTTGCTTCACACCCAACCGTCGTAGGAGATGAA
CTACCTTCCATACGAACCGAGGATCATCATCGAGCCGGCTCCTTCTCTTATTCCCCCACCAAGTTCATAACTTCTTCTTCTTCTTA
CCTCAAACGAGACAACCACCACCAAAGCCCTGTCTCAGTCCTCCACGGTCCAAAATCTCATCCAACAACAACAGCCCTCCCGTTAG
AACCTTCAATGTCGGAGGAAGTTGTCTCCGTGCAGGTTCCACCAGACTCTTCAACGGTTTCATCAGGAAAGCGGTAGGCTCGTGCG
TTGACTACTACGAGACAGACTCTGTTCTCCTCGATGAGCAGCTTCCTTTCCCCATGGACGATGACGATGATAAAGGAGGAGGAGGA
GAGAGACGTCAACCATACGCTAGAGACTTGCTTAGACGTGCTCAGCTGAAACACAGAATCTTCGAAGATGATGAGTCTGTCATCAA
AGCTTTTTACGAAGCCGAGAAAGCTCATAGAGGACAGATGGGAGCTAATGGTGACCCTTACCTGCAACATTGTGTTGAGGCTGCTA
TCTTACTGGCTGATATTGGAGCTAACTCCACCGTTGTGATTGCTGGGCTTCTACATGATACGTTAGATGATTCGTTTATGAGCTAT
GATTATATCCTCACAACTTTTGGTTCTGGAGTTGCTGATCTTGTCCAAAGGGTGTCTAAGCTTAGCCAGTTAAGTAAACTTGCTCG
AGAAAACAACACCGCGTGTAAAACCGTTGAAGCGGATCGTCTCCACACCATGTTCCTTGCAATAGCAGACGCGAGAGCCGTTCTTA
TTAAGTTAGCTGATCGGTTGCACAACATGGTGACGCTCTACGCTTTGCCACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891792 hypothetical protein ARALYDRAFT_892466 [Arabidopsis lyrata subsp. lyrata]9358e-099
NP_564652 RELA/SPOT homolog 3 [Arabidopsis thaliana]9331e-098
XP_002885006 hypothetical protein ARALYDRAFT_897663 [Arabidopsis lyrata subsp. lyrata]8192e-085
AAL03950 relA/spoT-like protein RSH2 [Nicotiana tabacum]7072e-072
AAQ23899 RSH2 [Nicotiana tabacum]7072e-072

Swiss-Prot top hits (Blast detail)Scoree value
Q931Q4 GTP pyrophosphokinase2491e-020
Q99TL8 GTP pyrophosphokinase2491e-020
O52177 GTP pyrophosphokinase2364e-019
Q8YG65 GTP pyrophosphokinase rsh2293e-018
Q2YN11 GTP pyrophosphokinase rsh2222e-017

TrEMBL top hits (Blast detail)Scoree value
Q9SYH1 F15I1.23 protein9339e-099
Q9M5P5 RSH39061e-095
Q6V9R3 RSH27072e-072
Q941I9 RelA/spoT-like protein RSH27072e-072
Q94B18 RSH-like protein6963e-071

Arabidopsis top hits (Blast detail)Scoree value
AT1G54130.1 RSH3 (RELA/SPOT HOMOLOG 3); GTP diphosphokinase9336e-101
AT3G14050.1 RSH2 (RELA-SPOT HOMOLOG 2); GTP diphosphokinase6835e-072
AT4G02260.3 RSH1 (RELA-SPOT HOMOLOG 1); catalytic2364e-020
AT4G02260.2 RSH1 (RELA-SPOT HOMOLOG 1); catalytic2364e-020
AT4G02260.1 RSH1 (RELA-SPOT HOMOLOG 1); catalytic2364e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  50%
 
211  50%

Unigene MembersMember information