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Information for unigene UN30255

FASTA Sequence
Unigene ID: UN30255Length: 1365 SSR 
TCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCTCCATTTTTTCTCCTTCGCTGATCTCTCTCATCCTCTGTTCAGCTATCAATCGTT
TCATACCAAGACCTTTCTGAATAAACTCTCAAGTTCTTGAAAGTCTATTATTTTCTTTCACTTTTAGAGAATGAGCTTGTCCATAT
AGTCAATGGATCTATCAACTCATCGAAGCATCCTCCAAGATCTGAACTTTCCTCCGCCTCCACCACCATCAATGCCCGTTTTCCAC
CGTGGGAGCTCGACGGGGACGAACTTTCCGATCATAGCCGTTGCAGTGATTGGAATCTTAGCCACAGCTTTGTTACTTGTAAGCTA
CTACGTTTTCGTGATCAAATGCTGTCTGAACTGGCATCGAATCGACATTCTTGGTAGATTCTCCTTATCCCGACGTCGACGCAACG
ACCATGGTCCTATCATGCTTTACTCTCCAAGGATAAACCGCGGTCTCGATGAATCCGTCATCAGAGCAATCCCTATTTTAAAATTC
AAGAAGAGAAGAGATGGAGAAGGTCAAAACGACAGCGTTTTCACAGAAGGAGAAGATAATTCTTCTCAGGAGTGCTCTGTTTGTTT
GAATGAGTTTCAAGAAGAGGAGAAGCTGAGGATTATCCCGAACTGTAGTCATTTGTTTCATATCGACTGCATCGATATTTGGCTTC
AGAACAATGCCAATTGCCCTTTGTGTAGAACTAGGGTTTCTTGCGACGCAAGTTTTCCTCCCGATCCCGTTTCTGCTCCAAGTACT
TCCCCAGATAACGCAGTCGTGGTTAGAGGCGAGAGTGAGTATGTTGTCATTGAGCTAGGTCTAGGGAACAGTAATAGCACCAATAG
TGACCGAGATAGTTCAAGAAACGGAAGGTTACTTGTGGTACAAGAAAGGTCGAATTCATGTTGCGTACTGACTGAAAACCAACAAA
ATTCGATCAGTCAGTCTCAGAGGAAGCTTGATCGAGGAGGGTTTCAGAGAAAAGGAAGAAAGCTTCAGAAAGTCACCAGTATGGGA
GACGAATGTATCGACATTAGAAGAGACAAAGATGAGCAGTTTGGTAGTGTTCAACCCATCAGAAGATCGATCTCGATGGATTCGTC
TGCAGATAGACAGCTGTATTTGGCAGTTCAAGAGGCGATTTTCCGAAAAAACCATGAAAATCCAGTGGTCGGAGAAGGAGGAGAAT
GTAGCAGTAGTAGCGGTAATTTTAGTAGTAACAGAGTGAAGAGATCTTTCTTCTCTTTTGGAAGCAGTAGACGTTCTAGAAGTTCT
TCCATATTGCCTCTTTCTTTTGAACCCTAATGGGTGGGCTACTTTGCTACTTTGTTTTCATATTCTTGTTCTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199155 RING-H2 finger protein ATL16 [Arabidopsis thaliana]14871e-162
XP_002865424 hypothetical protein ARALYDRAFT_494656 [Arabidopsis lyrata subsp. lyrata]14791e-161
XP_002892211 hypothetical protein ARALYDRAFT_887598 [Arabidopsis lyrata subsp. lyrata]10911e-116
NP_171931 RING-H2 finger protein ATL1 [Arabidopsis thaliana]10892e-116
ABZ04766 At1g04360 [Arabidopsis thaliana]10542e-112

Swiss-Prot top hits (Blast detail)Scoree value
Q9LSW9 RING-H2 finger protein ATL5K14949e-165
P93823 RING-H2 finger protein ATL1A11042e-119
Q9SRQ8 RING-H2 finger protein ATL3A2242e-017
Q9FL07 RING-H2 finger protein ATL5I2091e-015
Q9LX93 RING-H2 finger protein ATL5F2018e-015

TrEMBL top hits (Blast detail)Scoree value
Q0WRP6 Putative uncharacterized protein At5g4342014871e-162
B0ZCH9 At1g04360 (Fragment)10542e-112
B0ZCG9 At1g04360 (Fragment)10523e-112
B0ZCH0 At1g04360 (Fragment)10523e-112
B0ZCH2 At1g04360 (Fragment)10523e-112

Arabidopsis top hits (Blast detail)Scoree value
AT5G43420.1 zinc finger (C3HC4-type RING finger) family protein14956e-166
AT1G04360.1 zinc finger (C3HC4-type RING finger) family protein11051e-120
AT3G03550.1 zinc finger (C3HC4-type RING finger) family protein2242e-018
AT5G40250.1 zinc finger (C3HC4-type RING finger) family protein2098e-017
AT5G10380.1 RING1; protein binding / ubiquitin-protein ligase/ zinc ion binding2017e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
203  100%

Unigene MembersMember information