Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN30320

FASTA Sequence
Unigene ID: UN30320Length: 871 SSR 
AGCGGTAAGCGTCGTCACAAGGAAGGAAGACAAAACAACTAACGCCTCCTCCATTATTGTCCGAATCTTCTTCGCGTCTCTCAACA
ACACCACCACCACCACCTCTCTAATGATTCTCCTATAGAAGAAGAGTCCCTCAAAAAAACTCACAATCATGTTTCCATGATCTCTT
CTTTAGATCTCACCGCATGACGATCCGGAGTTTGATCCAGGAGATGCGGTCGAGACCGCACCGCGTGGTCCACGAAGCAGCAGCCT
CCTCCTCGACTGCTCCTGGTTCGGAGCCGTTCCGGTGGTCGGAGCTCCCCGACGAGCTGCTGAGAGAGATCTTGATCAGAGTCGAG
TCGGCGGACGGCGGCGACTGGCCGTCTCGGCGAAGCGTGGTGGCTTGCGCCGGTGTGTGCCGTGTATGGAGGATGATAGTGAAGGA
GATCGTGGCTGTTCCTGAAGTCTCCTCTAAATTGACTTTCCCAATCTCTCTCGAGCAGCCTGGTCCAAGGGGTTCACTAGTTCAAT
GCTTCATAAAACGTAACCGGAACACACAATCCTATCATCTCTATCTCGGGTTAACTAACTCTTTGACTGATAACGGGAAGTTTCTT
CTTGCCGCTTGTAAGCTGAAGCGTGCAACTTGCACTGATTACATCATCTCTTTGCGCTCAGACGATATGTCAAGGAGAAGCAACGC
ATATCTCGGTAGAGTAAGATCGAACTTCATTGGAACAAAGTTCACTGTCTTCCAAGGTAATCTGATGCCACAGAGATCATCAAAGA
TGGTGAAGAGCCGCTCTTCTAATCTCATGAAAGTTTCTCCTAGAGCTCCTTCAGGAAGTTACCCCGTTGCTCACGTTTCCTACGAG
TTAAACGTCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34002 unnamed protein product [Thellungiella halophila]10342e-110
XP_002882466 hypothetical protein ARALYDRAFT_477941 [Arabidopsis lyrata subsp. lyrata]9374e-099
XP_002873910 hypothetical protein ARALYDRAFT_909882 [Arabidopsis lyrata subsp. lyrata]9294e-098
NP_187289 tubby-like F-box protein 9 [Arabidopsis thaliana]9276e-098
NP_197369 Tubby-like F-box protein 11 [Arabidopsis thaliana]9142e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q9SQU1 Tubby-like F-box protein 99273e-099
Q6NPQ1 Tubby-like F-box protein 119149e-098
Q10LG8 Tubby-like F-box protein 66389e-066
Q8VY21 Tubby-like F-box protein 36371e-065
Q8H485 Tubby-like F-box protein 116163e-063

TrEMBL top hits (Blast detail)Scoree value
C0SVQ0 Putative uncharacterized protein At5g18680 (Fragment)9141e-096
B9RSZ5 Phosphoric diester hydrolase, putative6901e-070
A9PEU2 Putative uncharacterized protein6774e-069
B9HY64 F-box family protein6523e-066
A2XGP5 Putative uncharacterized protein6381e-064

Arabidopsis top hits (Blast detail)Scoree value
AT3G06380.1 ATTLP9 (TUBBY-LIKE PROTEIN 9); phosphoric diester hydrolase/ protein binding / transcription factor9273e-100
AT5G18680.1 AtTLP11 (TUBBY LIKE PROTEIN 11); phosphoric diester hydrolase/ transcription factor9148e-099
AT2G47900.1 AtTLP3 (TUBBY LIKE PROTEIN 3); phosphoric diester hydrolase/ transcription factor6414e-067
AT2G47900.2 AtTLP3 (TUBBY LIKE PROTEIN 3); phosphoric diester hydrolase/ transcription factor6414e-067
AT1G43640.1 AtTLP5 (TUBBY LIKE PROTEIN 5); phosphoric diester hydrolase/ transcription factor5204e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  100%

Unigene MembersMember information