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Information for unigene UN30342
| FASTA Sequence |
| Unigene ID: UN30342 | Length: 896 |
SSR | | AACCTCTCTCTGTCATTTTCTCACTCGCACACAGTCTCTCTCTCTCTAGGAGTCTTTTCTCTGCAATCAAAGCAAAGCTTTCACTC
TCTCACTTTCTCCGAAAACTGTCTCTCTTCCAAGTCTTCTTAAATAGAATAGACAATGTAACCGTCTCTTCTGCAAAACAATGCAC
CATCAATTCTCAATATCTCCACAGAAGATAGCTTGCTTGAGTCACTAGGTGGGCTTACTTGGAAATTAATTAAAAAGAAAGAAAAA
ATGAAAGGAGAGTCCTTTGGTTTGATAGTTGGGATCTCACTTGGTTTAGTAATAGGTGTGGTCTTAGCTCTTTCAGCGCTCTGCTG
CTTTATGTTCCATAGGCAGAGATCTCAGATTGCCAACAACAGTAGTGCCTCCAGACGAACCTCATCCCTTCCCATCAGAGAGAACG
GTGCTGATTCTTGCACCATTTTGTCTGATTCCACTCTCGCTCCTGACTCTCCTGTTAAATCCTCTTCCACCAATGCGAGGTCTCTT
TGGCTTGATGGGTTTATTAAGAAGACCAATGTGGTCTCTGCCTCTGGCATTTTGGAATATTCTTACAGGGATTTGCAGAAGGCAAC
GTGTAATTTCACGACTTTGATAGGCCAAGGCGCTTTTGGACCTGTCTACAAAGCTCAAATGTCCACCGGTGAGACTGTTGCTGTCA
AAGTTCTCGCTACTGATTCTAAACAGGGCGAGAAAGAGTTTCACACAGAGGTTATGTTATTGGGAAGGTTGCATCACCGTAACCTA
GTGAACTTGGTCGGCTATTGTGCTGAGAAAGGCCAACACATACTTATATATGTCTATATGAGTAAAGGAAGCTTAGCTTCTCACTT
GTACAGTAAACTACTACTTTACACTCTATATTAATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864347 kinase family protein [Arabidopsis lyrata subsp. lyrata] | 862 | 2e-090 |
| NP_568809 protein kinase family protein [Arabidopsis thaliana] | 856 | 1e-089 |
| NP_851189 protein kinase family protein [Arabidopsis thaliana] | 856 | 1e-089 |
| XP_002522815 serine/threonine-specific protein kinase, putative [Ricinus communis] | 804 | 1e-083 |
| ACM89579 protein kinase family protein [Glycine max] | 803 | 2e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| C0LGD7 Probable LRR receptor-like serine/threonine-protein kinase At1g06840 | 263 | 3e-022 |
| C0LGU1 Probable LRR receptor-like serine/threonine-protein kinase At5g37450 | 250 | 9e-021 |
| C0LGI2 Probable LRR receptor-like serine/threonine-protein kinase At1g67720 | 247 | 2e-020 |
| C0LGT5 Probable LRR receptor-like serine/threonine-protein kinase At5g16900 | 244 | 5e-020 |
| Q8L4H4 Nodulation receptor kinase | 240 | 1e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FIU5 Serine/threonine-specific protein kinase-like protein | 856 | 8e-090 |
| B9S9Z6 Serine/threonine-specific protein kinase, putative | 804 | 8e-084 |
| C6ZRY5 Protein kinase family protein | 803 | 1e-083 |
| C6TJ67 Putative uncharacterized protein | 799 | 3e-083 |
| C6TIQ0 Putative uncharacterized protein | 757 | 2e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G54590.1 protein kinase family protein | 856 | 5e-092 |
| AT5G54590.2 protein kinase family protein | 856 | 5e-092 |
| AT5G15730.1 serine/threonine protein kinase, putative | 403 | 2e-039 |
| AT5G15730.2 serine/threonine protein kinase, putative | 403 | 2e-039 |
| AT3G26940.1 CDG1 (CONSTITUTIVE DIFFERENTIAL GROWTH 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 270 | 4e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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