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Information for unigene UN30357
| FASTA Sequence |
| Unigene ID: UN30357 | Length: 1256 |
SSR | | CTCTCTCTCGGGTTCTTGTCGTGCGTATCCGGCGAGATGAACAACAACAACACAACACTAGTGAAGTTGAAGTGAACAAAGTGCAT
CTACTTGTAGCAAGCAAGCAAGCAAGCAACTACTTTTTTTTGTCCCTTGTTCGAATCTTTGTCTGCTTCAATCCACACCCAAGGGT
TTAAAGAGATGTGCCTTTCCTGTTCGGTGTAGATTATCTATTTTTGCTTCAGATGTCGTCGTCCACTCGAAAGCCTAGTAGTGGTC
ATGGAGCTGAACTCGAAGCTCAGAAGCGCTCCTCTTCAAATACTACTAAGTTAGCTGAGCCGCTGCAGTCAGCAAATCACGGAGTT
CCTGAGAAGTCGTTTAAGAAGCGATCCGGTGATCCTAAACCTGATTTCACCTCCTTGTCCACCGTTCTTGAGCATGTAGATTCGTT
GACTATCGATAGCAGCAACGACCAGGAGAAGAAAACATCAGGCTACGGCAGCGTCAAGACCAGCTCCGTCTCCGCGGCGAAAGTGA
GTGACGGCACGAGCAGTCTCGGCAAGACGAGCGGAAGCGCCAAGCTCAGCGGCGGCCGCCTCGATTTCATGGAGAGCGGTAAGAGC
AGTATCTACAGAGGAAGCACTAGCAGCGACGTGAGCGACGAGAGCAGTTGCAGCAGCTTTAGCAGCACTGTCAACAAACCTCACAA
GGCCAACGACTTGAGCTGGGAAGCGATCCAGGCGGTTAGGGCTAGGGACGGGGTGTTGGGACTGAGCCACTTCAGGCTGCTCAAGA
GGCTGGGATGCGGTGACATAGGGAGTGTTTATCTCTCTGAGCTGAAAGGGACAAAGTGTTACTTCGCGATGAAGGTGATGGACAAG
ACGTCTCTCGCTAGTCGCAAGAAGCTTCTAAGGGCTCAGACTGAGAGAGAGATTCTCCAGTCTTTGGATCACCCTTTCCTCCCTAC
GCTCTACACTCATTTCGAGACTGAGAAGTTCTCTTGCCTTGTCATGGAGTTTTGTCCTGGAGGAGACTTGCATACTCTCAGGCAAC
GCCAGCCTGGGAAGCACTTCTCCGAGCAAGCGGTTAAATTCTACATAGCAGAGTCATTGCTAGCTATTGAGTACCTGCACATGTTG
GGGATTGTGTACCGTGATCTCAAGCCTGAGAACGTTCTTGTTCGAGAAGACGGACATATAATGCTCTCTGACTTTGACCTCTCACT
CCGGTGTCTTGTCAGCCCCACTCTGGTGAAATCTGCCGCCGTTGAGTCTGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199586 protein-serine/threonine kinase [Arabidopsis thaliana] | 1467 | 3e-160 |
| AAL32579 protein kinase 5 [Arabidopsis thaliana] | 1467 | 3e-160 |
| XP_002863323 hypothetical protein ARALYDRAFT_494187 [Arabidopsis lyrata subsp. lyrata] | 1452 | 1e-158 |
| XP_002530422 serine/threonine protein kinase, putative [Ricinus communis] | 1210 | 2e-130 |
| XP_002269097 PREDICTED: hypothetical protein [Vitis vinifera] | 1208 | 3e-130 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A2YBX5 Protein kinase G11A | 969 | 6e-104 |
| Q0DCT8 Protein kinase G11A | 969 | 6e-104 |
| P15792 Protein kinase PVPK-1 | 943 | 7e-101 |
| Q05999 Putative serine/threonine-protein kinase PK7 | 799 | 3e-084 |
| P93025 Phototropin-2 | 530 | 5e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q39183 AT5g47750/MCA23_7 | 1467 | 2e-160 |
| Q8W4K8 Protein kinase 5 | 1467 | 2e-160 |
| B9SWQ3 Serine/threonine protein kinase, putative | 1210 | 1e-130 |
| B9HC18 Predicted protein | 1189 | 3e-128 |
| B9IH04 Predicted protein (Fragment) | 1180 | 3e-127 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G47750.1 D6PKL2 (D6 PROTEIN KINASE LIKE 2); kinase | 1467 | 1e-162 |
| AT5G55910.1 D6PK (D6 PROTEIN KINASE); kinase/ protein kinase | 985 | 8e-107 |
| AT4G26610.1 D6PKL1 (D6 PROTEIN KINASE LIKE 1); kinase | 984 | 1e-106 |
| AT2G44830.1 protein kinase, putative | 913 | 2e-098 |
| AT3G27580.1 ATPK7; kinase/ protein serine/threonine kinase | 799 | 3e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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