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Information for unigene UN30370

FASTA Sequence
Unigene ID: UN30370Length: 880 SSR 
GGTTCATCATCGAAGAAAGGATCCGGAGGAGACAAAGACGATCCAGAGTCAAAGCAGAGGAAGAGACTAAAAACCCTAGCGCTCGA
CAACAAACTCCTCTCCTCCTCTCCGTCCCGATGCCTCTCCTCTCTCAAACCATCGAAGCAAGTCCTGAAACACCAGGGCACCGACA
TCATCCGCAAGTCTCAGCGCAAGAACCGCTTCCTCTTCTCCTTCCCCGGTCTCCTCGCTCCCATCTCCGCCGCCACCATCGGCGAT
CTCGATCGCCTCTCCACCAAGAACCCCGTCCTCTACCTCAACTTCCCCCAGGGTCGGATGAAGCTTTTTGGAACGATTCTGTATCC
GAAGAACAGATACTTGACTCTCCAGTTCTCTAGAGGTGGCAAAAACGTCTTGTGCGATGACTATTTTGATAACATGATTGTGTTCT
CTGAGTCATGGTGGATTGGGACTAAAGAGGAGAACCCTGGAGAAGCTCGTCTTGATTTCCCTAAAGAACTCTCTCAGGTAGACAAA
ACTGAAGAGTTTGATTTTCGAGGTGGCGCAGGAGCAGCAGCAGCAGCTTCGGTCAAGATGACTCCTGAAACTGGTAGCCAACAACC
AACTGAGACAGAGACAGACTCACCTGAAGTTGTAATGGAGGAGATTTTGTCTGATGATGATGGAGAGTTTATGGACGATAAGATTC
AAGTCACACCAGTTCAACTAACTCCTCCTGTTCGTCACTCTCAGAGAAATTCTGGCAAGAAATTCAACTTTGCAGAAACTTCTCCA
GAAAACTCCTCAGATCAAAGTGAAGGCAATACATCTGATGAAGGAGATGAGAAGCCACTTTTGGAATCTGATTCTCCAATAAGAGT
TCATGAGGAAACTCAAGCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894107 hypothetical protein ARALYDRAFT_473976 [Arabidopsis lyrata subsp. lyrata]11624e-125
NP_564526 DNA-binding protein RHL1 [Arabidopsis thaliana]11525e-124
AAC69460 ROOT HAIRLESS 1 [Arabidopsis thaliana]11491e-123
NP_001117449 DNA-binding protein RHL1 [Arabidopsis thaliana]8075e-084
XP_002281960 PREDICTED: hypothetical protein [Vitis vinifera]7744e-080

Swiss-Prot top hits (Blast detail)Scoree value
O81242 DNA-binding protein RHL111522e-125

TrEMBL top hits (Blast detail)Scoree value
B3H502 Uncharacterized protein At1g48380.28074e-084
B9SVP0 Putative uncharacterized protein (Fragment)6722e-068
B9H278 Predicted protein6613e-067
B9FVR2 Putative uncharacterized protein5816e-058
Q6ZA53 Os07g0172200 protein5816e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G48380.1 RHL1 (ROOT HAIRLESS 1); DNA binding / protein binding11567e-127
AT1G48380.2 RHL1 (ROOT HAIRLESS 1); DNA binding / protein binding8072e-086
AT1G62760.1 invertase/pectin methylesterase inhibitor family protein1226e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  100%

Unigene MembersMember information