Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN30426

FASTA Sequence
Unigene ID: UN30426Length: 1596 SSR 
TTCTCAATACACAAAAAAGAAAGAGCCTTCTTGTAGAATTGAATCGATTGTGCCTGGTTAAAGTAATTGGGGGTTCTGTGGATCAG
ACAACGTGAACAAACCCTGTTTTCGTGTTGTGTCCTCTTTGGTTTTCTCATTTTCTATTTTTTCTCGGAGAAAAACCTTTTCTGAG
CTTTCCGGGAAAGTTTTGTCAGATTCGAAACAAAAAAAAAATCAAAGAAAATCCACAGAACAACCAAAACACAGATTCTTTCGATC
ACAATCCCTTTTGATCATTTCTCTAATCAATCACCTAAATTCACAACTCCTTGAATATGAAACCACCACAAGCAGCTTCGTTAGAT
AGGTGGAGAGACTATTTCCGGCGAGGAGATTCCGATATATTCGAGATCATCGATCACGCCATCATGGTTGCTGCTACAGATTGTCC
GATCAAATTCAAATCGAGAAGAGACAAAATCGCAGAGCTTCTCTTCTCTTGCAGAGTCACTCGCTGCTGCACCGGTTGCCACCACC
ACCACCACCGCGAGATATCTCTTACCGGAGAAGACGAGGCGGTTGATGTTGGTGCTGGTAGTAAAGAGAGCAAAGCTAACAGTAGC
AGAGGAGATAACAATCACATCAATCAGATTGTTAGCAATAATTATAATAATTATGATGATGAAGCTGAGGCTTTGAGTGATGCCAT
TGAAGAGTTTTCTTTGGTTTCTAAGGAAGTTGTTAGGATCAAAGAGATATTGCTCAACAGAGACGACGAGCCACACTCGGTGATAC
TCGAATCCCTGAGAAAGCTGAAGTTGATGTCTTTGGATGTGGATGTTCTTAAGAGTACTGAGATCGGAAAGGCTGTTAATGGCCTG
AGGAAACATGGTTCTGATCAGATACGCCAACTTGCAAAGACTCTTATCGCAGAGTGGAAGGAGCTGGTTGATGAATGGGTGAACAC
CACAAAGGAAATTGCTGGTGCTGAAGGTACACCAGAGTCTGCTAATCCATCTGTTGTTGATGAAGAAGAAGAAGAGTTTCCATCGC
TTCCATATGGTGTTGATATCTTTACACCGGAAGCAAATGGTTTTGAAATGTTAAATGGGGATTTCTTTGATTCCTTGGACCTTGAT
GGAAATCCTTGTAACTCTGGAGAATACAACACAAGCCGAGAAGACCAAAGAAGACCACACAAGAGAAGACCTGAGGGAAGAACACA
AATGAGGATACAAGACCCTCCTATTAAGCCATCATCATCATTATCTGATGGGACTAGGAGACCTCTAAAGCAAAATGTAGAACAAA
GGTTCAAGAACGTAGTGGGATCTGTTCAAAAACCCATGATCCAGAGGAGTAAACCGCTTTCTACACAACAGAAGCAGAAGGCTTCA
CAAGAAAAACATAAAGGTCTTGATGCAGACGCAAAGTTTGAGTTTGCTAAGAGGAAACTTCAAGAGAGCTACCAACACCATGACAA
CGCCAAGAAGCAGCGAACAATACAAGTACTTGAGACGATCCCTAAGCAAGGTAGTAACGCTCAGAAACCGCAACTCAAGAGACCTG
GATTGAAACAGCAGAGTTGGTTTAACGGACGCAAATAGCTTCTTTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871140 hypothetical protein ARALYDRAFT_487303 [Arabidopsis lyrata subsp. lyrata]14801e-161
NP_196133 Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana]14621e-159
AAL32865 Unknown protein [Arabidopsis thaliana]9602e-101
XP_002277659 PREDICTED: hypothetical protein [Vitis vinifera]7031e-071
NP_001189856 transcription elongation factor-like protein [Arabidopsis thaliana]6932e-070

Swiss-Prot top hits (Blast detail)Scoree value
P23881 Transcription elongation factor A protein 31256e-006

TrEMBL top hits (Blast detail)Scoree value
Q9FHK9 Similarity to unknown protein14621e-159
Q8W477 Putative uncharacterized protein At5g051409602e-101
B9IHN3 Predicted protein5273e-051
B9IHN0 Predicted protein5148e-050
B9RU65 Putative uncharacterized protein5067e-049

Arabidopsis top hits (Blast detail)Scoree value
AT5G05140.1 transcription elongation factor-related14681e-162
AT3G10820.1 DNA binding / protein binding / transcription regulator4392e-043
AT5G09850.1 transcription elongation factor-related2251e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  100%

Unigene MembersMember information