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Information for unigene UN30428
| FASTA Sequence |
| Unigene ID: UN30428 | Length: 1316 |
SSR | | GGAGACGAGCTGGTTCCAACCAAGAGGCCGCAATGTTGCACTTCAGAGGCGGATCTTTCCAGAGTAAGTTTGAGGGCAAGGAGCTT
TGGTCTGGTCCGGGTAATTGAGCTCATACCATACCTTAGACTCTTCTTCCCCTTTCAATAAGATTGAGGCAGGGGTCAAGTCTTAT
TACAAGAGCATTACGTGCCTTCCAAATATGCCAGAGCACTCAAGGAATACTACGCTGTAGATTAGAGGAACAATGCTGGATTTTGG
TGCACGCAATGACGTGGTGAATGTTTAGAGTTTGTAGACAACCTTAGAGCACCTTCATCGCGGTCTCCTAGGCCCGTATTTAGTGT
TTTTAGCTTTTAAAAAAAAAGGAAAATTGCTCAATTAAACAAGAGACGTCATTTAATTATGGTAAATAGGAGACGGTTTTTTGGGA
CACGCGTCACATATTCACGTTTCTCCTCTCTCTCTCTCTCGACGGATGCTCTTCTCTTCTTCTCTTGACTCCTGGACGAAACCGAT
TGTCTCTGGTCATCTCTCCTCGAATCTTGTCTCTGTTTGATTGGGCTCGGACTCGCTTGATGCAGGTCGGGACTGATTGGCTGACA
CAACCACTTAGGTGATTTTGCCTTATTGGTTTATAAGCAAGGATTGGCTCCCGCCTTGCATCAACTGAATCAGAGCTTCCAATGGT
GAAACGAGTCCAATTAGATCTGGAGAACAGTTTGATTCAAGACCTAGGGTTTGGATTCTTACAATATATGAGATTTGATTTCTAAA
GTAGAGAACTAGGATAAAATGTAATTGGTTTATGGAAATTTTCTGGCTTTTTTTCTTTAAATTGTTGATTTAAGTTAAAATCATTA
ATAAAAACGTATGTGATATTTGAAGAAAAAACGGTTTGACAAATCCACTGTATGATATGAAGAAGATAGAGATCTCGTTACATGGC
AATCTCTTGTCTTGGTTTTCCCTAAGAAGGTTCATCTATATGTTTTGATTTAGCTTCTTGATGAAATCAATGTTTATCTCTGGTCT
TATTGTAGTAGAAACGCAGGTTTAAAGATGTCCACTTCCATCTCTTTATTTCAAGACAGGCATCATCGGAGATGGGTTGCAGGGAA
ACTGGATCCTGACTTTGCAGGAAAGGGACTTGACTTAGTCACATAGGCCGTGGGCACTACAAGCATTAGGTGGATGGGAGAATGAG
CTTGATTATTGCCAAGAGCTCCTTGAAGCTGACGTCTTTAACAACTCCTTATGGAATCAGGTCTTGGTGGAGAAACTGTGGAGTAT
CTGATGAAAATCATTTTCTATCCGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34577 unnamed protein product [Thellungiella halophila] | 184 | 2e-011 |
| ABK26054 unknown [Picea sitchensis] | 180 | 5e-011 |
| XP_002310440 predicted protein [Populus trichocarpa] | 176 | 1e-010 |
| CAB91608 farnesyltransferase subunit A (FTA) [Arabidopsis thaliana] | 175 | 2e-010 |
| NP_567084 farnesyltransferase A [Arabidopsis thaliana] | 175 | 2e-010 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LX33 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha | 175 | 8e-012 |
| P93227 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha | 163 | 2e-010 |
| O24304 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha | 155 | 2e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9NZJ3 Putative uncharacterized protein | 180 | 3e-011 |
| B9HH66 Predicted protein | 176 | 1e-010 |
| B3LF91 At3g59380 | 175 | 1e-010 |
| Q0WS67 Protein farnesyltransferase subunit A (Fragment) | 175 | 1e-010 |
| B9T797 Protein farnesyltransferase alpha subunit, putative | 171 | 4e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G59380.1 FTA (FARNESYLTRANSFERASE A); farnesyltranstransferase/ protein heterodimerization/ protein prenyltransferase | 175 | 7e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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