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Information for unigene UN30439

FASTA Sequence
Unigene ID: UN30439Length: 849 SSR 
TCTTCTTCTTCTTCTCCTACTCTTATTCAGAGAGAGAAAAGCCATGGATGGGTACGAAGCGACTAGGATTGTGCTCTCTCGCATCC
AAACTTTAGACCCAGAAAACGCATCAAAGATAATGGGTCTCCTCCTTCTCCAAGACCACGGTGAGAAAGAGATGATAAGGCTAGCT
TTTGGTCCAGAGACTCTTGTTCACTCTGTAATAGCGAAAGCCAAGAAAGAGTTAGGTCTCATGAGCTGTTCAAGACCTCCTTGGAG
TCAAGAGGAGTTGATTAGCCCTAGGAATAACAACAACCGTGGCTCTTCTCTCAACCCAGCTTCTTTGCCCTTCTACGCTAATGGAG
CAAGATCTTCCAAGGAGATGACCAACAACGAGTTCATGGATGATGTTAACCCAAGAGGTGACTTTTTGGGGTCTGTGCATGCAAGA
AGTGGTAGCTGCGTTCTGGACGGTTTGGGGTATGGTGATTCTTCTGACTTAGGGTTTGGTGGTGTACCCTGTTCTTATTACGCTAG
AGGCTTCTGCAAGAACGGAAGTAACTGCAGGTTCGTTCACAGTGAGGGAGGAGCTGAGTTAGTTGGCTCTCCAAGCAGAATCGAGC
TTCTTAGGTCTAACTCGGTACCTCCAAGACTTGCTCATCACTTCATGACTCGCTCTTCTTTGCCTTCCTTCTCTCCAAAAGGAGTT
AACTTGCAGAGCAGCGACGCTCAAAGAGCTGCTGCTGCTTTGATGATGGGAGATGAACTGCAGAAGCTTGGGAGATGGAGGCCTGA
GAGGATTGATCTCTCTGCTATGGCTTGTCCAGCTTCGAGACAGATCTATCTTACATTTCCTGCCGACAGTAGGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877836 hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp. lyrata]12422e-134
AAM66020 unknown [Arabidopsis thaliana]12252e-132
NP_190763 zinc finger CCCH domain-containing protein 46 [Arabidopsis thaliana]12206e-132
AAL87320 unknown protein [Arabidopsis thaliana]12206e-132
CBI28616 unnamed protein product [Vitis vinifera]4178e-039

Swiss-Prot top hits (Blast detail)Scoree value
Q9SV09 Zinc finger CCCH domain-containing protein 4612203e-133
Q10M00 Zinc finger CCCH domain-containing protein 222695e-023
Q0D3J9 Zinc finger CCCH domain-containing protein 532687e-023
Q10LZ9 Zinc finger CCCH domain-containing protein 232652e-022
Q9SJ41 Zinc finger CCCH domain-containing protein 181461e-008

TrEMBL top hits (Blast detail)Scoree value
B6UEB5 Nucleic acid binding protein2993e-025
B9NAY1 Predicted protein2958e-025
A5B9W5 Putative uncharacterized protein2877e-024
Q6T284 Predicted protein2771e-022
C5X1P1 Putative uncharacterized protein Sb01g0364902724e-022

Arabidopsis top hits (Blast detail)Scoree value
AT3G51950.1 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein12203e-134
AT3G51950.2 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein12203e-134
AT3G63450.1 RNA binding / nucleic acid binding / nucleotide binding3001e-027
AT3G63450.2 RNA binding / nucleic acid binding / nucleotide binding3001e-027
AT3G21100.2 RNA binding / nucleic acid binding / nucleotide binding1801e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
202  100%

Unigene MembersMember information