Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN30446

FASTA Sequence
Unigene ID: UN30446Length: 1292 SSR 
AGGATATTTTTTTCATCGCAGACAAGCACAAATAGAGTTTCACAGAAGGAAGCAAAGGATTAAAACATAAAATTCTACAAACGCAA
AAAGAAAAGAAAAGGAAAAATCTAAACATAACATGATGAACGAGATAATGTCGGGAATAACGATTATAATGTGAAATTCATTAGTC
CATTAGAAACTTCTCTAACCTTTCTTCACTCTCGCAAATTCCTCGGCGGAAAAGCTCCTCCGTCGGTATATATATAGTGGTTATCA
ATACATATATACATCAGAAGGGACCTCTTCCACCTGAATTCCCCGGCCAACCTTCCACCGGAAGTTGCACATTCGGTTGCATATTC
ATGGGTAAATTAAAGAACGGAAGTCCTCCTCCTCCTCCTCCGGCGGAAACCTCCGGAAACAAGTTTCCTCCGCCGTTAGATCCTCC
CCCTCCTCCTAGATGTTGCTGCTCATCTTCTTCTAATGGAAGTCTCTCATAAGCAACATTAGTAAACGAAGAAGCGATTACAATCA
CGGGTCCAGCTGCCGTAAGCTCACCGACAACGCTTCCTCCGACGACTTGTCCTTGTCCTCCGGCCAAAAATATAGTCAAACTCGTT
GCTCCAGGAGGAGCCGGAGGAGGAAGGAACGATCCGGAGAGAGAAAGAATCTCGAACGTTCCTTGTAGCGTCACGACCGCTCCAGA
CGCAGATGGCTGACGTATGGTGACGTTGGTCACCGTTCCACTACCGCTCAGAACGCAGATCCCTCGCTGTCTTCGACGAGCGTAAG
TCGCAACGCAGTCAAAAACGTCGCAGCCGTTTGTTACTTCAAGAATATGAGCTCTCAGAGTGTTTGCGCTCTCGCGCGTGATTATC
ACCGGAGGTTTCGGTTTGTTTTTGGATCCAGGTGGTCTTCCACGTGGACGACGGCCAACAACGTTGCCTCCTCCGCCACCGTCACC
TCCAGAGCTTCCTGATCCTCCACCAGAGGCTAAGTCAAGACCTTGATGGTTGTTGTCGTCGTCGTCGACGGTAAAGTGACCAAGTC
CGGCTCCTGGTGTGACGTCATCTGATGCTGAGCTGTGGTGGAGATGGAGATCGGGACGATGGAGCTGGTGATTAACGTAACCAAAA
GCTGTGCCTAGATCAAGACCAGCCATGCCCACATCAAAAGCAAAGTAGAGATTTTAATTTGTAAAAAAATATATAAAAACCACACA
CACAACAACAAGATTAAAATAAAGCTTCTCTTCTTTGTAGATTTTCTATAATTTTCTTTTAGAACAAGGAAAAAAAATAAACTAGA
AA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABD65635 hypothetical protein 23.t00073 [Brassica oleracea]14809e-162
ABD65169 hypothetical protein 40.t00056 [Brassica oleracea]14082e-153
NP_193515 putative AT-hook DNA-binding family protein [Arabidopsis thaliana]13974e-152
XP_002868035 hypothetical protein ARALYDRAFT_493093 [Arabidopsis lyrata subsp. lyrata]13893e-151
XP_002326520 predicted protein [Populus trichocarpa]10471e-111

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7C9 Putative DNA-binding protein ESCAROLA6051e-061

TrEMBL top hits (Blast detail)Scoree value
Q25BL0 Putative uncharacterized protein14806e-162
Q2A964 Putative uncharacterized protein14081e-153
O23620 AT-hook motif nuclear localized protein 2313973e-152
B9MU17 Predicted protein10471e-111
B9N2N4 Predicted protein10236e-109

Arabidopsis top hits (Blast detail)Scoree value
AT4G17800.1 DNA-binding protein-related14113e-156
AT2G35270.1 DNA-binding protein-related9543e-103
AT4G12050.1 DNA-binding protein-related7142e-075
AT3G04570.1 DNA-binding protein-related6963e-073
AT4G22810.1 DNA-binding protein-related6928e-073

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  50%
 
181  50%

Unigene MembersMember information