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Information for unigene UN30502

FASTA Sequence
Unigene ID: UN30502Length: 945 SSR 
GGACTCTCTATCGACTGAGACGCAGCGGAACAACGGCGACGAAGGTTAATCAGAAGAAGATACGAAGCTGCGAGTCTTGGCATTTT
TTTTAGGCACCGATGTCGGGTAATAACAACAACAACAACAACAATCCACAGAAGCCTCAAGGCTCTTCTGCTGCGCCTTCACCCTT
CGGCAACCCTGGGGTGCAGGCCTCTGCATCATCTGTTCCTGGAAACCAGGGCTTCACTCAGCAGCAGTCTCACATGGCACCTAACT
TCCCAGCTCAGTTTCAGTTCTCACAGGCCCAGGCCTTGGCCCATGCTCAAGCCCAAGCCCAGTCTAAAGCTCAAGCTCAGTTCCAA
GCTCAGATGCAAGCAGGGATGTCGACGATGAACCAAGGACAACAAGGCGGCGGCTCCTCCCAGGGCGGGATTGGTGTGTTGGGTTC
GTCTTCTTCTCCTTCCATGACTCCTGGAAGCTTGAACATGAAGAGGTTCCAGCAGAGACCCTCGATGCGACCTCCTTCTGGCTTCC
CCTCGAGCAACAACAACACTATCTCCCCCATGAGAACGATGGAGTTAACTCCCGCTGCGAGGAAGAAGAAGATGAAGCTTCCTGAG
AAGTCTTTGCAGGAGCGGGTGGCGGCGATCTTGCCCGAGTCTGCGTTATACACGCAGCTTCTCGAGTTTGAGTCGAGGGTCGATGC
TGCTTTGAGTAGGAAGAAAGTTGACATCCAGGAGGCTCTCAAGAACCCTCCTTGCACGCAGAAGACGCTTAGGATCTACGTGTTCA
ACACGTTTGCGAATCAACAGAACAACACCATCCCTGGGAACCCGAATGCTGACCCGCCGACATGGACTCTTAAGATCGTTGGTAGG
ATCTTAGAAGACGGGGTGGATCCGGACCAGCCAGGGTTTGTTCAGCAAGCAAACCCATCTCATCCCAAGTTCTCATCTTTCTTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196921 SWI/SNF complex component SNF12-like protein [Arabidopsis thaliana]10138e-108
XP_002873653 SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata subsp. lyrata]10121e-107
XP_002298619 chromatin remodeling complex subunit [Populus trichocarpa]8174e-085
XP_002273749 PREDICTED: hypothetical protein [Vitis vinifera]7843e-081
CAN60756 hypothetical protein VITISV_041986 [Vitis vinifera]7816e-081

Swiss-Prot top hits (Blast detail)Scoree value
Q9FMT4 SWI/SNF complex component SNF12 homolog10449e-113
Q96GM5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 12052e-015
Q61466 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 12052e-015
Q6STE5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 32015e-015
Q6P9Z1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 32006e-015

TrEMBL top hits (Blast detail)Scoree value
B9GJS7 Chromatin remodeling complex subunit8173e-085
A5AZ58 Putative uncharacterized protein7814e-081
B9S7A2 Brg-1 associated factor, putative7421e-076
B9RAH2 Brg-1 associated factor, putative5781e-057
B9N100 Chromatin remodeling complex subunit5673e-056

Arabidopsis top hits (Blast detail)Scoree value
AT5G14170.1 CHC110635e-116
AT3G01890.1 SWIB complex BAF60b domain-containing protein4587e-046
AT2G40030.1 NRPD1B; DNA binding / DNA-directed RNA polymerase1244e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
191  50%

Unigene MembersMember information