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Information for unigene UN30568
| FASTA Sequence |
| Unigene ID: UN30568 | Length: 883 |
SSR | | GGATGTAAACTCTCTCTCTTCCATTTTCTCTTTCTTCTATGAATTTTTATTTTTTCCCTTTTTATTTTTATTTTTCATTTCTGTAA
CTTCTCCGTCTAAGACTGAGAGAGTGAGAATTTTTTTTTTAAAGAAAATAGATCAAAACTGTTGACGAAGATGCAGCTGGGTGGTA
GTACAACCACAGCCGCAACCGCATCTGCACCGCCACCGTCGAACGATTCGGCCACTATAGAAGCTGCGGCAGCTGCAGCAGCGGTT
GTAGCTTTTGAAGTGTCTGAAGAGATGAACGACCGTGGTTTTGGAGGAAACAGGTGGCCTCGGCAGGAAACGCTTGCGTTACTGAA
AATACGATCTGACATGGGAATAGCGTTTCGAGACGCTAGCGTTAAAGGACCCTTATGGGAAGAGGTTTCCAGGAAAATGGCTGAGC
TTGGTTACGTAAGAAACGCCAAAAAATGCAAAGAGAAATTCGAAAACGTTTACAAATATCATAAACGAACCAAAGAAGGTCGTACC
GGAAAATCCGAAGGCAAAACTTATCGTTTCTTTGATCAGTTAGAAGCTCTCGAGACTCGACCAACCTCTTCTTCCCTCCATCATCA
ACAACAACAACAACAACAACCACCACAGACTCAACCGCAACCGCAGCCGCCTCTACGACCGCACAACAACAACAACAACAGTTCCA
TGTTCTCCACTCCTCCTCCAGTAACAACTATTATGCCACCTATAACAAACACAACTGTCCTTCCTTATACTCAGCCTGTGAACGTA
CCTTCCTTTCCAAACATATCCGGAGACTTTCTGTCGGATAATTCAACTTCTTCTTCTCATTCGACGTCTTCTGACGTCGAGATCGG
CGACGGAACCACCACGACACGGA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_177814 putative trihelix DNA-binding protein [Arabidopsis thaliana] | 922 | 2e-097 |
| XP_002887660 hypothetical protein ARALYDRAFT_895569 [Arabidopsis lyrata subsp. lyrata] | 681 | 2e-069 |
| XP_002306695 predicted protein [Populus trichocarpa] | 536 | 1e-052 |
| AAL65125 GT-2 factor [Glycine max] | 508 | 2e-049 |
| XP_002266195 PREDICTED: hypothetical protein [Vitis vinifera] | 501 | 2e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6P1R3 Uncharacterized protein C11orf61 | 121 | 8e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9C6K3 GT-like trihelix DNA-binding protein, putative | 922 | 2e-097 |
| B9H7S0 Predicted protein | 536 | 1e-052 |
| Q8W239 GT-2 factor (Fragment) | 508 | 2e-049 |
| B9T2G0 Putative uncharacterized protein | 491 | 2e-047 |
| Q9AVE4 DNA-binding protein DF1 | 491 | 2e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G76880.1 trihelix DNA-binding protein, putative | 922 | 1e-099 |
| AT1G76890.2 GT2; transcription factor | 442 | 5e-044 |
| AT1G33240.1 AT-GTL1 (GT2-LIKE 1); DNA binding / transcription factor | 429 | 1e-042 |
| AT5G03680.1 PTL (PETAL LOSS); transcription factor | 307 | 2e-028 |
| AT3G10000.1 EDA31 (embryo sac development arrest 31); transcription factor | 304 | 5e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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