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Information for unigene UN30671
| FASTA Sequence |
| Unigene ID: UN30671 | Length: 965 |
SSR | | GTTGTTCACTTCATCACATGCTCCTCGTCTCTCTCTCTCTCTCTCTCTCTCACTCAATCACTAGTTTCAGTTACGCAGCTGCTCAG
ACTCTGATCTCATCACTGTTTTGTCTGTTAAAACAAAAGATCCAGTTTTCATGGACAATTAAATATAACAGTGACAACCCAAATCC
TTTTCTCTTCTTCTCTTTCATTCTCTTCCTCTGTTTAAACTCTCATTCATGGCTCCAAACTCAGTGGCAGTGACAATGGAGAAGCC
AGACAACTTCTCTTTGCTGGAGATCAACGGCTCAGATCCATCCTCATTCCCTGACAACAAGCGCAAATCCATCAGCCCAAAGCAAT
TCTCATGGTTCATCCTCCTCAAAGCTCACAGAGTCGTCTCTTCTCTCTCGTGGCTCTTCGCTTCGGTCAAAAAGCGTCTCGCTTTC
TCCTCCAAATCCATAAACGAAGAAGAAGATCCCAAAAGCAGAGGAAAACAAATGTACAGATTCATCAAAGCCTGTCTTGTCATCTC
CATAGTCGCCTTGTCAATAGAAATCGTCGCTTATTACAAGAACTGGAATCTAGATCTCGTGAACCGACCGTCTTGGGAGGTTCGCG
GGCTTGTCGAGTGGTCTTACGTGGCTTGGCTCTCGTTTCGATCCGATTACATCGCTCCTATTGTCATCACTCTCTCCAAGTTCTGC
ACTGTCCTCTTCTTGATCCAGTCTCTTGATCGGTTAGTCCTCTGTCTTGGTTGCTTCTGGATCAAGTTCAAGAAGATCGAACCTAA
GCTCAAAGACGATGAACTCGATCTAGAAGACGCATCCAACTTCCCAATGGTCCTTATTCAAATCCCAATGTGCAATGAACGAGAGG
TGTATGAACAATCGATAGGAGCAGCATCACAGCTTGATTGGCCAAAGGATAGGATCTTGATTCAAGTTCTTGACGATTCAGACGAT
TCGAACTTACAGCTTCTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875428 hypothetical protein ARALYDRAFT_484602 [Arabidopsis lyrata subsp. lyrata] | 1166 | 1e-125 |
| NP_566835 xyloglucan glycosyltransferase 4 [Arabidopsis thaliana] | 1159 | 9e-125 |
| XP_002517383 transferase, transferring glycosyl groups, putative [Ricinus communis] | 891 | 1e-093 |
| CAN82135 hypothetical protein VITISV_002645 [Vitis vinifera] | 811 | 2e-084 |
| XP_002280124 PREDICTED: hypothetical protein [Vitis vinifera] | 811 | 2e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJP4 Xyloglucan glycosyltransferase 4 | 1159 | 4e-126 |
| Q7PC70 Probable xyloglucan glycosyltransferase 2 | 518 | 9e-052 |
| Q69L19 Probable xyloglucan glycosyltransferase 2 | 518 | 9e-052 |
| Q9SB75 Probable xyloglucan glycosyltransferase 5 | 510 | 7e-051 |
| Q9SJA2 Probable xyloglucan glycosyltransferase 8 | 504 | 4e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RUD8 Transferase, transferring glycosyl groups, putative | 891 | 8e-094 |
| A5AGR2 Putative uncharacterized protein | 811 | 1e-084 |
| A5BPE5 Putative uncharacterized protein | 533 | 2e-052 |
| B9RNP7 Transferase, transferring glycosyl groups, putative | 517 | 2e-050 |
| B9ILD5 Predicted protein | 510 | 1e-049 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G28180.1 ATCSLC04 (CELLULOSE-SYNTHASE LIKE C4); cellulose synthase/ transferase, transferring glycosyl groups | 1164 | 1e-127 |
| AT4G31590.1 ATCSLC5 (CELLULOSE-SYNTHASE LIKE C5); cellulose synthase/ transferase, transferring glycosyl groups | 612 | 1e-063 |
| AT2G24630.1 ATCSLC08; cellulose synthase/ transferase, transferring glycosyl groups | 552 | 9e-057 |
| AT3G07330.1 ATCSLC6 (CELLULOSE-SYNTHASE LIKE C6); cellulose synthase/ transferase, transferring glycosyl groups | 447 | 1e-044 |
| AT4G07960.1 ATCSLC12 (CELLULOSE-SYNTHASE LIKE C12); cellulose synthase/ transferase, transferring glycosyl groups | 435 | 3e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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