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Information for unigene UN30690

FASTA Sequence
Unigene ID: UN30690Length: 847 SSR 
CGTACTATGTCCGATACTGAGCACCAAGGAGCGACGCCGCGAAGCTACTAGGGTTTCTGTTTTCTTCTGATCATCCGTCTTCGTCC
CTGTTTCAGGTGACTCGCAAGGGTTGCTGGGATGTTATAAAGATCTGTTTAGGATTTTACTTTAAAGAGTTAGTGAACAAAAAGAA
ATGGATGATGATAATGGGCTTGAGCTCAGCTTGGGTCTCTCATGTGGTGGAGGGAAAGCTAAGGGTGCTAATAACAATGCTGGAAC
CTCCTCGGAGAATCATCATCACAATGTAGAAGGAGATAATAGAAGCGCTAAAGTGATTGATGACTTCAAGAACTTCCTTCACCCTA
CTACTTCTCAAAGACCACCTGCAGCAGCAGCAGACCCGAGTTCTGAACCTCCTCCTCCTCCTCAGAATTTCTTCAACGACCTCTCC
AAAGCTCCTACATCCGCCGACGCTGCCGAAGCTGCTTCCACGAAGCCTCTGTGGGTGGAGGATGAGGCTATGAAAGAAGCAGGAAG
CAGCAAAAGAAAGTTCGGGTTCCAAGAGATGAATGATGAAAAAAAGAAGAAGGCAAAGGCATCCCTTGTTTCGAACGCCACAGATG
AAGGTTCAACAGCTGATAACGAAGATGTAGCGGAATCTGAAGCAGGCGGTGGTGACCTTGCGAAGGATGTGGTGGTGGCTGCTCGT
CCAGCCGCTGATATGGACAGCATAGCAGGTCAGAGGAAGAGTAACCATGTTGAAGAGTTTACTGCAAACCGCAACATGAGTTACAA
CGTACCTTTCACGGTTCATCCACATAACGTCATCACTGGTTTACCTTACTCTTTACCGGGGAAAGAGTCTGGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194620 AFP-like protein 2 [Arabidopsis thaliana]6732e-068
AAK96863 putative protein [Arabidopsis thaliana]6695e-068
XP_002867433 hypothetical protein ARALYDRAFT_491865 [Arabidopsis lyrata subsp. lyrata]6453e-065
XP_002325016 predicted protein [Populus trichocarpa]2985e-025
XP_002514251 conserved hypothetical protein [Ricinus communis]2573e-020

Swiss-Prot top hits (Blast detail)Scoree value
Q9SV55 AFP homolog 26738e-070
Q53HY2 Ninja-family protein mc4101665e-011

TrEMBL top hits (Blast detail)Scoree value
B9ILR7 Predicted protein2984e-025
B9RKK7 Putative uncharacterized protein2572e-020
B8Y4P5 Putative uncharacterized protein (Fragment)1542e-008

Arabidopsis top hits (Blast detail)Scoree value
AT4G28910.2 LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48; Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source: NCBI BLink).6737e-071
AT4G28910.1 LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48; Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source: NCBI BLink).6737e-071
AT4G28910.3 LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48; Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source: NCBI BLink).6737e-071

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  50%
 
191  50%

Unigene MembersMember information