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Information for unigene UN30801

FASTA Sequence
Unigene ID: UN30801Length: 964 SSR 
GGACATTTAGATATGCAGCATAGACATATACGTGTATATATATATATATATACAGATGTACTCCTTCCCATCTCTGATTGTAGATT
CTTGAGATTTATAAAACTACTTAAGATTCTAATCCTATGATTATTGCGAGAACTAAAAAGAATAATCAGTGAATTTTAGAGAGAAG
AAAGAGAGATTACATTACTTTCTTCATAGGAAAGCCTTTCTTTCTTCTTCTGCATTCCTCAAACTGTATCTTCCCAAGAAACCCAA
CACAGAAGAAAATCAAGAAGTTTCGTGAATTGTTGTGGAAATGAAACTCGGAGCTCCGAGAAAGAAGTCAGGTTGGGTTATGCTCC
AAGTTCTTCTTCTCCATCTCCTTGTTCAAAGTGTTCATTCTCAGAAATCAGGAAACAAACTGAACATCACAAATCCTGGACAAAGT
ATACCAGGCTTAGCAGTTCAGCTAAGGAGAGTTAGTAATGAGAAGGTGGTTGTTGATAATGGTATTATTCAAGTTACTTTCTCGAG
CCCACAAGGTTTGATAACTGGAATCAAATATAGTGGCATCGATAACGTGTTGGACGAAGAAATTGACGATCGTATTGGGACGTAGC
CTGGTATGAACCGGAAAAAGCATTGGAAATTGACAAACTAGAAGGAACTAAATTCGAAATCATAACTCAGAACGAAGAACAAATTG
AAATTTCATTTACAAGAACGTGGACGATCTCGAAACGTGGCTCCTTGGTCCCCCTTAACGTAGACAAAAGGTACATTATTCGAACT
GGTGTTTCTGGAATATACATGTACGGTATATTAGAGAGGTTAGAAGGTTGGCCCGACGTGGACATGGACCAGATTAGGATCGTCTT
CAAGCTCAACCCCAAAAAATTTGATAAAATTGTGTGTTTGGTCTCTGTGAATTCAGATGATCAAGTATTATGAAATTATCTATCAA
TAAGACCATTTTCGTGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179847 rhamnogalacturonate lyase-like protein [Arabidopsis thaliana]4984e-048
XP_002880453 hypothetical protein ARALYDRAFT_481121 [Arabidopsis lyrata subsp. lyrata]4932e-047
AAS99719 At2g22620 [Arabidopsis thaliana]4922e-047
NP_195508 Rhamnogalacturonate lyase family protein [Arabidopsis thaliana]3741e-033
NP_001189578 rhamnogalacturonate lyase-like protein [Arabidopsis thaliana]3506e-031

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ZQ51 Putative uncharacterized protein At2g226204983e-048
Q6NKW8 At2g226204921e-047
Q84W85 Putative uncharacterized protein At4g379503747e-034
B9HCP7 Predicted protein3495e-031
B9SMM6 Lyase, putative3452e-030

Arabidopsis top hits (Blast detail)Scoree value
AT2G22620.1 lyase4982e-050
AT4G37950.1 lyase3744e-036
AT4G38030.1 lyase3037e-028
AT1G09880.1 lyase2983e-027
AT1G09910.1 lyase2688e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information