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Information for unigene UN31080
| FASTA Sequence |
| Unigene ID: UN31080 | Length: 1306 |
| SNP | AATCCATGAAAATAAATATGAATTCTTAAACATTATTATTTTGGAGACTAATTGAACATTGGTGAAGTTACATAAAGAGATAGAGA
GAGAGGTTTACACATTTTCTTTCTTTTACTCTAAAGATCTAAAAATAACAGTTTATTCAGTTTTTGTCGTTGGAGTTTCTGTTGAT
GGACAAAAACTTGCTGAACATCTTCTTAGGTCGGCCAGGGATTGCACAGAAAGCCTTAAACCGAGATGGAGTTCTTCCTCCTCCTT
GGTTCATAAACCTCTCGTCTATCTCTTCATCTTCAGCTAACTTGCTTCTCAGTGTCCCTGAGAGCTTTGACTTGGGAGATTTGAGA
CCAGACACGCTCCACTGATCTTCCGGTCCTGCCATGCTTGTGGTCGTGCTGAAAGCTGCTGCACTTGGATTAGAAGGATCAATGTT
GTGTGCCGCAAGGAGCGCTTTGATGTTGCTTGGAAGCTCGGTCATTTTGACTTCACCGTTGTTGGTAGCTGCAGCGGCTCGCGCCT
GCTCATAGAAGAGGACTTGAACCACAACTCTCAGCGGAAGCATCTCGTTCTGCGCCGCGTGCATACACGCTTCCATCGATAGTTTC
TTGCAGTCCAAGACTCTGCAGATTCTTTTTCTTTCTGATTTATTCAGATTCTTGTGAGCCTTGAGATATATGTCAATGGCTCTGTA
GAGATCATCATGATCAAGCCTAGAAAACTCAGGGACACTCTCAGCTAAACTAACAAACTTTGAGAGCGGTAGGCTCACATCTCTAG
CAATCTGTTGGAGGTATCCATCCACAAGCTTAGCCACTTTAAGCTTTGAGCTGTGAGAGGCAGAGGAAGACCTCCTACTTTCTTGG
AACTCAAGATCAATATTCTCAGCCGAACGAGATCTTTGTCTCCTATCCATCATACCCTTTTTACATCTCAGAGGACTTGTTGGTGG
ACTAGTCTGCCCTAAGATCATAAACTGTTCCAAGATAGTCGCCACAATGTCCACATCGTATAGCATTTCAGATTTGTATGACGTTG
GAGGTATTAACAAGTCACTCACCGTTGCTTCTTCTAACTGAAGAGCCACCCTTCTTGCTAGTTCCATTTTGGAAGAAGATGAGGCG
TTTAAGATGTTAGCTGCTTTCAAGAGCTTAAGCAAGAAGCTGCAAGAAACCGCGGCTTTCTCAGCAGGAAGCAAGCTTATAATGGA
CTCCAACAACAACCTATGCTTGGATGAAACATCAGTCTCCGAATCCGAGTCAGAATCCTCTTTCTTGCCGACTTGTTTCCGGTTTC
TTTGCAGAGAAGGAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176957 phototropic-responsive NPH3-like protein [Arabidopsis thaliana] | 1796 | 2e-198 |
| BAJ34381 unnamed protein product [Thellungiella halophila] | 1745 | 2e-192 |
| XP_002311763 predicted protein [Populus trichocarpa] | 1331 | 2e-144 |
| XP_002530034 signal transducer, putative [Ricinus communis] | 1322 | 2e-143 |
| XP_002282444 PREDICTED: hypothetical protein [Vitis vinifera] | 1254 | 1e-135 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FMF5 Root phototropism protein 3 | 580 | 9e-059 |
| Q5KS50 Coleoptile phototropism protein 1 | 516 | 2e-051 |
| Q9S9Q9 BTB/POZ domain-containing protein At1g30440 | 343 | 3e-031 |
| Q9FKB6 BTB/POZ domain-containing protein At5g48800 | 309 | 2e-027 |
| Q682S0 Root phototropism protein 2 | 263 | 5e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C9V6 At1g67900 | 1796 | 1e-198 |
| B9HLQ4 Predicted protein | 1331 | 1e-144 |
| B9SVL5 Signal transducer, putative | 1322 | 1e-143 |
| A5BVB1 Putative uncharacterized protein | 1208 | 2e-130 |
| B9HTS8 Predicted protein | 774 | 4e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G67900.1 phototropic-responsive NPH3 family protein | 1796 | 8e-201 |
| AT1G67900.2 phototropic-responsive NPH3 family protein | 1796 | 8e-201 |
| AT3G26490.1 phototropic-responsive NPH3 family protein | 681 | 1e-071 |
| AT5G64330.1 NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3); protein binding / signal transducer | 580 | 8e-060 |
| AT1G03010.1 phototropic-responsive NPH3 family protein | 424 | 9e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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