Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN31167

FASTA Sequence
Unigene ID: UN31167Length: 791 SSR 
GGATTCTGGATTTGATGGGCTTCAACATACATTAGCCACCGGTCTCCTATGCCTTGTCTTTGTAACGAAGATGGAACTGAGGTTGA
ATACAGAGTTTGGGACCCTTTCCGCTCTGATTTAGCTGCTGCAGTTATTTGTGGTCCTGACAACATTTGGATCAAACCTGGTGCTA
AAGTTCTTTACCTTGGTGCTGCTTCTGGAACCACTGTCTCTCATGTTTCTGATATTGTTGGACCTGAGGGATGTGTTTTTGCTGTC
GAGATTTCTGAGAGAAGTGGAAGAGAGTTGGTGAACATGGCAAAGAGGAGACCTAATTTGATACCAATCATTGAAGATGCCCGAAA
TCCTGCTAAATACAAAATGCTTGTGAGCATGGTTGATGTCATATGCGCTGATCTTGTTCAGCCAGATGAGGCTATGATATTAGCTC
TGAATGCGTCTTTTTTCCTCAAAACTGGAGGTCACTTTTCGATCATAATAAATGGCCGGTATACATCACTTAACAATGCAACCAGA
AGAAGTTTACTCGGACGAAATAATGAAGCTGCGAGCGGATGAGTTGAGACCAGTAGAGCAAGTGACTCTTGAGCCTTATGCGCATG
ACCATGCTTATGTTGTTGGTGTAAGCAAAAAGCTGCCTACTACTACTACTACTACATTAGCCAATCAAGACATCTTTACTTAGTTT
GTGATTATTGTGAGATGTTTCACATTACGTTTGTATTTTATAAGGGTTTAATGCCTTTTCATGTTCTGTCTACATCTACTCTCGGG
AAGTAGAGTTTTTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568772 rRNA 2'-O-methyltransferase fibrillarin 1 [Arabidopsis thaliana]5924e-059
XP_002864176 hypothetical protein ARALYDRAFT_495317 [Arabidopsis lyrata subsp. lyrata]5871e-058
NP_567724 rRNA 2'-O-methyltransferase fibrillarin 2 [Arabidopsis thaliana]5817e-058
XP_002869663 hypothetical protein ARALYDRAFT_492264 [Arabidopsis lyrata subsp. lyrata]5782e-057
AAK76701 putative fibrillarin 2 protein AtFib2 [Arabidopsis thaliana]5711e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q9FEF8 rRNA 2'-O-methyltransferase fibrillarin 15922e-060
Q94AH9 rRNA 2'-O-methyltransferase fibrillarin 25813e-059
Q9FHB3 Putative rRNA 2'-O-methyltransferase fibrillarin 35016e-050
P22087 rRNA 2'-O-methyltransferase fibrillarin4972e-049
P35550 rRNA 2'-O-methyltransferase fibrillarin4972e-049

TrEMBL top hits (Blast detail)Scoree value
Q0WLG3 Fibrillarin homolog5923e-059
B9RIU8 Fibrillarin, putative5709e-057
B9IDB8 Predicted protein5691e-056
B7VCB9 Fibrillarin 25636e-056
B9I464 Predicted protein5628e-056

Arabidopsis top hits (Blast detail)Scoree value
AT5G52470.1 FIB1 (FIBRILLARIN 1); snoRNA binding5922e-061
AT4G25630.1 FIB2 (FIBRILLARIN 2); snoRNA binding5813e-060
AT5G52470.2 FIB1 (FIBRILLARIN 1); snoRNA binding5151e-052
AT5G52490.1 fibrillarin, putative5016e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information