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Information for unigene UN31167
FASTA Sequence |
Unigene ID: UN31167 | Length: 791 |
SSR | | GGATTCTGGATTTGATGGGCTTCAACATACATTAGCCACCGGTCTCCTATGCCTTGTCTTTGTAACGAAGATGGAACTGAGGTTGA
ATACAGAGTTTGGGACCCTTTCCGCTCTGATTTAGCTGCTGCAGTTATTTGTGGTCCTGACAACATTTGGATCAAACCTGGTGCTA
AAGTTCTTTACCTTGGTGCTGCTTCTGGAACCACTGTCTCTCATGTTTCTGATATTGTTGGACCTGAGGGATGTGTTTTTGCTGTC
GAGATTTCTGAGAGAAGTGGAAGAGAGTTGGTGAACATGGCAAAGAGGAGACCTAATTTGATACCAATCATTGAAGATGCCCGAAA
TCCTGCTAAATACAAAATGCTTGTGAGCATGGTTGATGTCATATGCGCTGATCTTGTTCAGCCAGATGAGGCTATGATATTAGCTC
TGAATGCGTCTTTTTTCCTCAAAACTGGAGGTCACTTTTCGATCATAATAAATGGCCGGTATACATCACTTAACAATGCAACCAGA
AGAAGTTTACTCGGACGAAATAATGAAGCTGCGAGCGGATGAGTTGAGACCAGTAGAGCAAGTGACTCTTGAGCCTTATGCGCATG
ACCATGCTTATGTTGTTGGTGTAAGCAAAAAGCTGCCTACTACTACTACTACTACATTAGCCAATCAAGACATCTTTACTTAGTTT
GTGATTATTGTGAGATGTTTCACATTACGTTTGTATTTTATAAGGGTTTAATGCCTTTTCATGTTCTGTCTACATCTACTCTCGGG
AAGTAGAGTTTTTTTTT
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GenBank top hits (Blast detail) | Score | e value |
NP_568772 rRNA 2'-O-methyltransferase fibrillarin 1 [Arabidopsis thaliana] | 592 | 4e-059 |
XP_002864176 hypothetical protein ARALYDRAFT_495317 [Arabidopsis lyrata subsp. lyrata] | 587 | 1e-058 |
NP_567724 rRNA 2'-O-methyltransferase fibrillarin 2 [Arabidopsis thaliana] | 581 | 7e-058 |
XP_002869663 hypothetical protein ARALYDRAFT_492264 [Arabidopsis lyrata subsp. lyrata] | 578 | 2e-057 |
AAK76701 putative fibrillarin 2 protein AtFib2 [Arabidopsis thaliana] | 571 | 1e-056 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9FEF8 rRNA 2'-O-methyltransferase fibrillarin 1 | 592 | 2e-060 |
Q94AH9 rRNA 2'-O-methyltransferase fibrillarin 2 | 581 | 3e-059 |
Q9FHB3 Putative rRNA 2'-O-methyltransferase fibrillarin 3 | 501 | 6e-050 |
P22087 rRNA 2'-O-methyltransferase fibrillarin | 497 | 2e-049 |
P35550 rRNA 2'-O-methyltransferase fibrillarin | 497 | 2e-049 |
TrEMBL top hits (Blast detail) | Score | e value |
Q0WLG3 Fibrillarin homolog | 592 | 3e-059 |
B9RIU8 Fibrillarin, putative | 570 | 9e-057 |
B9IDB8 Predicted protein | 569 | 1e-056 |
B7VCB9 Fibrillarin 2 | 563 | 6e-056 |
B9I464 Predicted protein | 562 | 8e-056 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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