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Information for unigene UN31185
| FASTA Sequence |
| Unigene ID: UN31185 | Length: 829 |
SSR | | GGAAGAAAGAAACTTGCGGTACACACACACACACATCTACAATCATCGTCAGCTTCCTCTTCCCCCCCCCCTAAAAAAACAATATT
TTTGCTTCTTTATTGAATCCTCTGTTTCGTTCATCAAGAAAACAGAGAATACTACAAAGATATGGGCAAGAAAGATGAGAAAGCCG
AAGCTGTTCTACGTTTACTCAGGAAACAATCTCCACTCACTCTTAAACAAGAGAAGTTCTGTAACAGAGAGTGCGTGGAGAGATTC
TTGAACGTAAAAGGAGACAACGTCAAAAAAGCTGCGAAGCAGCTAACTTCATGCCTTTCGTGGAGACAAAATTTTGATATTGACCG
AATGGGGGCAGAGGAGTTCTCGGCGGAGTTAACCGACGGCGTATCTTACATCGCCGGCCACGACGGAGAATCCAGACCCGTTATCA
TGTTCCGTTTCAAGCATGATTATCAGAAGCTGCGTAGCCAGAAACAATTTACGCGTTTAGTGGCGTTCACGATGGAGACTGCGATC
TCGAGCATGTCCAGAGACGCGGAACAGAGCGTTGTTCTACTCTTTGATGCGAGTAAGCAACTTATTTTACGTTTTTCTCCCTGGTA
ACCTTGCAAACCTCCGTGAGTCGAGTCTGTACTAATCCGTAATTTGCTCGCCGTATTTTGGGTTTTTGTTGTGGTTTTGGTTTTCT
TATTTTGGATTGAGGCTTGTCGGGGACCGGGTTTTCGGACATGTATTATGCATTTAATTTCATGTCCGAATTGTCCCTTTTATGTG
TCGACGTTAACTTAAACAATCGTGTGGGTAATTATTACTAATCACGATTCTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885501 hypothetical protein ARALYDRAFT_479753 [Arabidopsis lyrata subsp. lyrata] | 643 | 5e-065 |
| NP_188880 Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana] | 633 | 7e-064 |
| XP_002892285 hypothetical protein ARALYDRAFT_887722 [Arabidopsis lyrata subsp. lyrata] | 481 | 3e-046 |
| NP_172029 Sec.4-like phosphatidylinositol transfer family protein [Arabidopsis thaliana] | 481 | 3e-046 |
| CAN68227 hypothetical protein VITISV_040534 [Vitis vinifera] | 471 | 4e-045 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUV9 Gb|AAC80580.1 | 633 | 5e-064 |
| A5BR09 Putative uncharacterized protein | 471 | 3e-045 |
| B9HV57 Predicted protein | 471 | 3e-045 |
| B9RTT0 Transporter, putative | 462 | 3e-044 |
| B9HJX2 Predicted protein | 459 | 7e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G22410.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05370.1); Has 1032 Blast hits to 1032 proteins in 165 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 243; Plants - 390; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). | 633 | 3e-066 |
| AT1G05370.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, hypocotyl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22410.1); Has 283 Blast hits to 283 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 127; Plants - 122; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 479 | 2e-048 |
| AT1G22180.2 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | 146 | 9e-010 |
| AT4G08690.2 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | 136 | 1e-008 |
| AT4G08690.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | 136 | 1e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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