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Information for unigene UN31308
| FASTA Sequence |
| Unigene ID: UN31308 | Length: 1029 |
SSR | | GAGATATGAAGACATGATGTTCCAACTAATCTTCATATGGCTAGGCATTGAAGCTACAAACCGCAAGAGATCCGGCTTGCTGGTGA
TCCCTGGACGAAGAAGTGGATCCGCGTCTTCCTTTTGGTTCAAGACGTGGAGAAACTTGGCAATGTTCGGAAGCACCATTTCCCGG
CAATGCAGATGCAACAAAGGAACTTTCGACAAGACGCTTCCCTTTTGGACATCAAGACCTTCTGGTCTGCGCAGTTTATACTGTTT
CCCAGTGGTCGGTTCGATGTCAACCTGAGGCATCTGTTTCCACCTCTTGTGCACAAACCAACCGTACTTATAGTCACCTACTATTG
GAGTGCCGAGAGCTTCGGCACAGTGTACACGTAGCTGTTTCAAGAAACAACACACAAAAAAAGTTAGGGGAGAAACAACACGCAAA
ATGGTGGTCCAACAAGAGTACTACTACCTGATGCTTTCTGCCAGTGATAGGACGAAGTTCTAACCATGAACATCCGTTGATCATTG
GTCCTAACACTCTATACTTTGTTATTGCTTCTTGTGAGGCTTCAAAGCCTGAACCTTGCGCCAAAACCACCCTGTCTGTTTTTCCA
TCATCTAGTAGCACCTAAACACATGTTTTCTTTCGAATCATTTTCTTTAGATCCATGCATCAGAAGCATAATTAATGAGAGAGAGA
GATACCTTTGAAAGAGGAGCTGAAATGACTCCTTCCTTGTCTTTTGGAGAACCAATCACCAGTGCCCAATATCGCTGATACATTGC
TTCACATGCTTTGTTCCAAGCCTATGTATTAACGATTCACTTAACAATATTATGCTCGACTTTTCTTTTGCTTAGGAGGCCGTAGT
GTGCTGTTAGTGTACGTACCTTACACCTTGAGTTTCTCCCTTTGAAATCACTGAACACGGAGTGAAGATGATCTATACTTTCTTTG
GTTCGACCCATTACTAAGAGACCACTAGTTTCCCTATCAAGACGATGCACCTGACCACAGAAGAAAACTCAAATAAGATTTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| AAC83020 Contains similarity to gi|1786244 hypothetical 24.9 kD protein in surA-hepA intergenic region yab0 from Escherichia coli genome gb|AE000116, and to hypothetical YABO family PF|00849 [Arabidopsis thaliana] | 603 | 3e-060 |
| BAD43982 unnamed protein product [Arabidopsis thaliana] | 598 | 1e-059 |
| NP_178012 RNA pseudourine synthase 3 [Arabidopsis thaliana] | 598 | 1e-059 |
| XP_002887761 hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata] | 597 | 2e-059 |
| CBI18448 unnamed protein product [Vitis vinifera] | 549 | 6e-054 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5XET6 RNA pseudourine synthase 3, mitochondrial | 602 | 2e-061 |
| Q0J4D4 RNA pseudourine synthase 3, mitochondrial | 503 | 5e-050 |
| Q9LT72 RNA pseudourine synthase 4, mitochondrial | 263 | 4e-022 |
| Q69K07 RNA pseudourine synthase 4, mitochondrial | 131 | 7e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9SLG9 Ribosomal pseudouridine synthase, putative | 549 | 4e-054 |
| B9N0H4 Predicted protein (Fragment) | 543 | 2e-053 |
| A2YX47 Putative uncharacterized protein | 491 | 2e-047 |
| A3BUX1 Putative uncharacterized protein | 491 | 2e-047 |
| C5YIB1 Putative uncharacterized protein Sb07g027030 | 487 | 6e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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