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Information for unigene UN31396
| FASTA Sequence |
| Unigene ID: UN31396 | Length: 1201 |
SSR | | GGAAAAACAAATCCTCAAAATTTACATAAAATTTTCTCAACAGAGAGAGAGAGAAAAAAAAAACAAGAACACAAGAATGTTGTGTA
GAGACATGAGAGGTGTACTCTTCTCCGTCTTACTTCTGTTCCCTGCGTTCTCTTTCTCTGCTAACACTTTGTCGGCCACAGAATCT
CTAACCATCTCAAGCAACCAGACCATTTCGTCTCCTGGTAACGTCTTCGAGCTTGGTTTCTTCAAACCCTCTTCGTCTTCTCGTTG
GTATCTCGGGATATGGTACAAGGCGATCTCCAAGAGAACCTACGTTTGGGTCGCAAACAGAGACCATCCTCTCTCCACTTCCATCG
GAACTCTTAAAATCTCCGAGAGTAACCTCGTCGTTGTCGATGGTTCCGACACAGCTGTTTGGTCGACGAATCTTACCGGAGGAGGA
GATGTGACATCTCCGGTGGTAGCAGAGCTTCTCGATAACGGTAACTTCGTGCTAAGAGACTCTAACGCAGACGGAGTTTTGTGGCA
GAGTTTCGATTTTCCGACAGATACGTTACTCCCTGAGATGAAACTCGGCTGGGATCTCAAAACCGGGTTTAACCGGTTCTTGAGAT
CTTGGAAAAGTTCAGATGATCCATCAAGCGGCGACTTCTCGTTCAAACTCGAGACCAGAGGGTTTCCGGAGGCTTTCTTGTGGAAC
AAAGCGACGCGAGTGTACCGGAGCGGTCCGTGGAATGGAATCCGGTTTAGCGGTGTACCGGAAATGTAGCTGTTGGATTACATAGA
GTTCAACTTCACAGCGAGTGATCAAGAAGTGACTTACTCATTCCAAATCACCAAAGACAACATGTACTCGAGGTTAAGCTTGAGTT
CCACCGGGTTGTTACAACGGTTCACTTGGATTGAAGCAGTACAGAACTGGAACCAGTTCTGGTTCGCACCAAAAGACCAATGTGAT
GATTACAAAGAGTGCGGAACTTTCGGTTACTGCGATTCCAACACGTATCCGGTTTGTAACTGTATGAGAGGGTTTCAGCCGAGGAA
TCCACAGGCGTGGGGGTTAAGGGATGGGTCTGATGGTTGCGTGAGGAAGACGGCTCTGAGTTGTGACGGTGGAGATGGGTTTGTGC
GGTTGAAGAAAATGAAATTGCCGGATACTGCGGCGACTAGTGTGGACAGAGGAATAGGTATTAAAGAATGTGAAGAGAAGTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAA67145 receptor-like kinase [Brassica oleracea var. acephala] | 1886 | 7e-209 |
| CAA73133 serine /threonine kinase [Brassica oleracea] | 1883 | 1e-208 |
| BAB69683 receptor kinase 5 [Brassica rapa] | 1873 | 2e-207 |
| NP_193869 receptor kinase 3 [Arabidopsis thaliana] | 1651 | 1e-181 |
| AAB33487 ARK3 product/receptor-like serine/threonine protein kinase ARK3 [Arabidopsis thaliana, Columbia, Peptide, 851 aa] | 1651 | 1e-181 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P17840 S-locus-specific glycoprotein S13 | 1240 | 2e-135 |
| P07761 S-locus-specific glycoprotein S6 | 1225 | 1e-133 |
| P22553 S-locus-specific glycoprotein BS29-2 | 1211 | 5e-132 |
| Q09092 Putative serine/threonine-protein kinase receptor | 1196 | 3e-130 |
| P17841 S-locus-specific glycoprotein S14 (Fragment) | 1136 | 3e-123 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| P93068 Receptor-like kinase | 1886 | 4e-209 |
| O04383 Serine /threonine kinase | 1883 | 1e-208 |
| Q948X2 Receptor kinase 5 | 1873 | 1e-207 |
| D6NTR1 ARK3 (Fragment) | 1651 | 8e-182 |
| O81905 Putative receptor serine/threonine protein kinase ARK3 | 1651 | 8e-182 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G21380.1 ARK3 (A. THALIANA RECEPTOR KINASE 3); kinase/ transmembrane receptor protein serine/threonine kinase | 1651 | 4e-184 |
| AT1G65790.1 ARK1 (A. THALIANA RECEPTOR KINASE 1); kinase/ protein kinase/ protein serine/threonine kinase/ transmembrane receptor protein kinase | 1384 | 4e-153 |
| AT1G65800.1 ARK2 (A. THALIANA RECEPTOR KINASE 2); kinase/ protein kinase/ transmembrane receptor protein serine/threonine kinase | 1350 | 4e-149 |
| AT3G12000.1 S-locus related protein SLR1, putative (S1) | 1083 | 3e-118 |
| AT4G27290.1 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding | 799 | 3e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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