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Information for unigene UN31445
| FASTA Sequence |
| Unigene ID: UN31445 | Length: 1233 |
SSR | | GTGAGAACTCTTTTAACTTGACAAGCGTAGCAGCTTTGATAAACAATATGCAGTAGGATCATCCTCTTTATATCACCTTAAACACA
TATAATCTATCTTATTTTTCTTATTTTGATTTTCTTTCAAAAAATAATATACTACATTTGTAGATGTCTTCAAGAAGCCTATATAG
AGCTCTTACTACTTACCATTGTAAGAGATAGACCTCTTCAAGAAACTTGACCTCCCAACAACCGAAGATCCAGAGTTGCCTCTCTT
CAACTTCTCTTTTCCTCTACCAGCAGCAACAACTTCACTTACCCTTAAACCCGATATCGAGCTAAAAGACACTGACCTCCTCACTA
GCTGCAGCGACTTATCTTCTTCTTCTTCTTCATCACTAACAACAATACTGAAAAACTCTTCAGCTTCTTCCACATCACCTCTCTCG
GTTTCTTCATTGAGTTCTCCACTTTCCTCCTCCGGTATCCTCACAAGGATCTCCTCAACACCGTCACTATCATCATCAGTTACCGC
GACAACAGGAGCACGACAAACCGGGCAATTGGTGTGTGATCTAAGCCAAGTATCAATACAAGGGACATGAAAAGCATGTCTACACT
TTGGTAACAATCTAAGCGTCTCTTCTTCTTCGAACTCGCTTAAACAAACCGAACAATCCGTACCTTCCACCACACCATCTTGTTTG
CTATACTTACAAACTTTGATCGAGCTTATAACCGTTGGATTCAAACCGATGGTTCTTATATGCCAAACCGGATGATCAACAATAAC
CGGTGACGGTCCATCAAACTCCCAGTTCCTAGCTTCCTCCATGCTCCATCTTCTTGATATAGCTATTGATCTTCTCCTCCTGTTGT
ACCATTTGAAACAGAGAACGAGTAGAGTAAGGAGAAAGAGAGTTGTGATGATGGAGGAAGTTGAGATGATCAAGATCCTTTTCACG
TTTTCGTCTATGTAGTGGTGAATCACTGGAGGTGGTGGAGAAAGATCTGTATCTAGGTAGTTCTCGCAGATGGAAAGACAGTCTTT
AGAACAAATGGGTCCACAAACTCCTAAAGTTGTGAGTTCTTCTTTGCAAACCAAACAGTCCGTGTCCGTGATGTTGGCCATATCCT
TCGACAGAAACCTGTGAAGGATGCTCATGATTCTTGCTTCAAGATCATCAATAAGCTAGAGAGAGGCGAGAAGAGAAGAGACGATG
AGAGTCTTCGTCTTTGTTTTCTCTTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567926 RING-finger domain-containing protein [Arabidopsis thaliana] | 1067 | 6e-114 |
| AAL91149 unknown protein [Arabidopsis thaliana] | 1025 | 5e-109 |
| XP_002869206 hypothetical protein ARALYDRAFT_328381 [Arabidopsis lyrata subsp. lyrata] | 1014 | 9e-108 |
| ABF19017 At4g33565 [Arabidopsis thaliana] | 721 | 8e-074 |
| XP_002522602 ring finger protein, putative [Ricinus communis] | 510 | 2e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LFY8 RING-H2 finger protein ATL1O | 360 | 3e-033 |
| Q9LF64 Probable RING-H2 finger protein ATL5G | 338 | 9e-031 |
| Q9LX93 RING-H2 finger protein ATL5F | 325 | 3e-029 |
| Q9SRQ8 RING-H2 finger protein ATL3A | 299 | 3e-026 |
| Q5EAE9 RING-H2 finger protein ATL5C | 252 | 9e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RXG9 Putative uncharacterized protein | 1025 | 3e-109 |
| Q1LYW2 At4g33565 | 721 | 6e-074 |
| B9S9D3 Ring finger protein, putative | 510 | 2e-049 |
| C6TA46 Putative uncharacterized protein | 480 | 5e-046 |
| B9IJC3 Predicted protein (Fragment) | 421 | 4e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G33565.1 protein binding / zinc ion binding | 1071 | 8e-117 |
| AT1G72220.1 zinc finger (C3HC4-type RING finger) family protein | 360 | 2e-034 |
| AT5G17600.1 zinc finger (C3HC4-type RING finger) family protein | 338 | 8e-032 |
| AT5G10380.1 RING1; protein binding / ubiquitin-protein ligase/ zinc ion binding | 325 | 3e-030 |
| AT3G03550.1 zinc finger (C3HC4-type RING finger) family protein | 299 | 3e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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