Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN31455

FASTA Sequence
Unigene ID: UN31455Length: 1113 SSR 
ATTTCTTCTCTCTCTCTCTGTGTTTCTTTCATGGGTGTTAAGAGTAGTGTTTAGCTCGTGAAGGCTCCTCCTCTTCTTCCTCTTTT
CTTCTGGTGTTCTTCAATGGCGAATGTAGATGGAAATGATCTCACAACCTCTTTCTCAAGGTCTTACAACGATGCTCTATACACAG
AGGTATGGAAAGCTTGTGCAGGTCCATTAGTGGACGTTCCTCTTGCTGAAGAGAGAGTTTTCTACTTCCCTCAGGGTCACATGGAA
CAACTTGTGGCTTCAACTAATCAGGGAATTGAATCAGAAGAGATACCTGATTTCAAACTTCCTCCCAAGATACTGTGTAGAGTTCT
CAGTGTCATGTTAAAGGCTGAGCATGAAACAGATGAAGTCTACGCTCAGATCACATTAAAACCAGAGGAAGATCAAAGTGAACTTA
CAAGTCTTGATCCACCTATTGTTGAACCAACGAAACAAATGTTCCACTCGTTTGTAAAGATTCTAACAGCTTCAGACACAAGCACT
CATGGTGGATTCTCTGTTCTTCGTAAACACGCTACTGAATGCTTGCCTGCCTTGGACATGACACAAGCTACTCCTACTCAAGAGCT
TGTGACTAGAGATCTTCATGGGTTTGAATGGAGGTTTAAGCATATCTTCAGAGGACAACCTAGGAGGCATTTGCTTACAACGGGTT
GGAGTACATTTGTATCATCCAAAAGACTTGTAGCTGGAGATGCCTTTGTGTTCTTGAGGGGTGAGAATGGAGATTTGAGAGTTGGA
GTAAGGCGTTTAGCTAGGCATCAGAGCACAATGCCTACTTCTGTTATCTCGAGCCAGAGCATGCATTTGGGAGTCCTTGCTACAGC
TTCTCATGCTGTTGTTACCAAAACTATCTTCCTTGTGTTTTACAAGCCTAGGATAAGCCAGTTCATAGTAGGGGTTAACAAGTATA
TGGAAGCTATGAAGCATGGATTCTCTCTTGGCACAAGATCAGATGAGGTTTGAAGGAGAAGAGTCTCCTGAAAGATGTTTACTGGT
ACTATTGTTGGAATTGGAGATCTATCTTCACAGTGGCAGCTCTAAATGAGATCTTTGCAGTCCGATGGGATGAGCCACACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567119 auxin response factor 18 [Arabidopsis thaliana]14152e-154
XP_002876640 hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp. lyrata]13722e-149
CAB71113 auxin response factor-like protein [Arabidopsis thaliana]13679e-149
XP_002880250 hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp. lyrata]12952e-140
BAJ34449 unnamed protein product [Thellungiella halophila]12943e-140

Swiss-Prot top hits (Blast detail)Scoree value
Q9C5W9 Auxin response factor 1814151e-155
Q9ZPY6 Auxin response factor 1112814e-140
Q5NB85 Auxin response factor 110288e-111
Q9XED8 Auxin response factor 910252e-110
Q0JCZ4 Auxin response factor 910224e-110

TrEMBL top hits (Blast detail)Scoree value
B9RYN1 Putative uncharacterized protein11311e-121
B9GXS6 Predicted protein (Fragment)11079e-119
B9GL31 Predicted protein (Fragment)10962e-117
B9N784 Predicted protein10711e-114
B9SPB6 Auxin response factor, putative10602e-113

Arabidopsis top hits (Blast detail)Scoree value
AT3G61830.1 ARF18 (AUXIN RESPONSE FACTOR 18); transcription factor14159e-157
AT2G46530.1 ARF11 (AUXIN RESPONSE FACTOR 11); transcription factor12832e-141
AT2G46530.3 ARF11 (AUXIN RESPONSE FACTOR 11); transcription factor12813e-141
AT4G23980.1 ARF9 (AUXIN RESPONSE FACTOR 9); transcription factor10252e-111
AT4G23980.2 ARF9 (AUXIN RESPONSE FACTOR 9); transcription factor10252e-111

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
61  50%

Unigene MembersMember information