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Information for unigene UN31542

FASTA Sequence
Unigene ID: UN31542Length: 1187 SSR 
GAGTCTAATCTCGTCATGCCTTGTTATTCCCAGAATCCGTTTGTTTATGGCTGATGCCTTTTGGGAGATAACAAAGTAGAATCAAA
TCAAGAATAAAAATCGACTTGAAATCTTCCCTTCTTATGTTGTGCATTTGAAAGTGTGATTCAGAATTTCTGGCTTCACTAGTTTC
ACGCTCAAGAAAATATTTCATTTAATCTTCTAATTTGCTGTCATCTTTTTTTTTTCCCATTCAAATAGGAGTCGCTTGAGAAGCCT
GCGGCTTTACAATATCGGACCGATGAACTACAATTCCTTACTGTCAGTTTGTTCGAATCTCACTGATCTGAGGATTGTTGGATCCT
ATTGTCCATTTTTGAATCTATTTATGACCCTGTCAAAAAAATATCGTCTGATAGAGCACCTGTGCTTAGTGAACCATCACCCCGTA
GGTAGAATGGACGCGTCAGCAGGTTCACACTTGATAGAGTTGGTGACCAAGTCCCCCTACTTAACTTCTCTAACACTCGTAGGTTT
TCAACTAACCAATGAAATGGCCCGAAATCTTGTTAAGAATTCTCGAAAACTGAAGTATCTGAATTTGTCCAGATCGCCTAAAATCA
ATGGTCATTTTTTGAGGTATTTGGGAAATAGCTGCAAAGAGAATCCACTTAAGACTCTAATAATGCGCAACTGCGTTAAACTAGAG
GAGACAGAAGTCTTGGAACTTTGTAACTCCTTAATGAAAGGAAACTTCAAATTCATTCGTCACGTTGATGTTTCCAGCTACAACGG
CTTAGTTTCTGATGGTGGCGTGAGATCTAGATCTTACAACCCTACGTTACCTCTGGAGAAGCTGAAAGAAGAAAGACCAGATGTGA
CACTTGTGGCGGATTTTCCATTAGAAAGGTCAGGGAAGCGTTACCTTGTGGAAGGGGATGACGAAGAGCTGAGGGAGATAGAGATG
ATGGAAGCCAAGAACGATGAAGATGATGATGATGATGAGGACTCCTCTGATGATGACGATGACGTTTAGCTTTGATGATTGGAGGA
GTTGTTAATCAATCAATCGTCTATATTTCCGGCACGACCAACATATAACTATTTTTATTATATTCTTAATAAAACCATAACCGAAG
TTCCTCCTTCATACAGAACATAGAGATTTTATTACTTCATCTTATCTCTTATTAATTTCTCAACTCATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAD42970 unnamed protein product [Arabidopsis thaliana]7272e-074
NP_192183 F-box protein SKIP17 [Arabidopsis thaliana]7235e-074
XP_002872816 hypothetical protein ARALYDRAFT_490282 [Arabidopsis lyrata subsp. lyrata]6804e-069
XP_002272905 PREDICTED: hypothetical protein [Vitis vinifera]3776e-034
XP_002872818 hypothetical protein ARALYDRAFT_352555 [Arabidopsis lyrata subsp. lyrata]3633e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q0WRC9 F-box protein SKIP177232e-075

TrEMBL top hits (Blast detail)Scoree value
A5BK27 Putative uncharacterized protein2351e-017
B9S410 Putative uncharacterized protein2181e-015
B9H893 Predicted protein1822e-011

Arabidopsis top hits (Blast detail)Scoree value
AT4G02740.1 CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02760.2); Has 1691 Blast hits to 1200 proteins in 170 species: Archae - 2; Bacteria - 109; Metazoa - 687; Fungi - 197; Plants - 199; Viruses - 23; Other Eukaryotes - 474 (source: NCBI BLink).7232e-076

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information