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Information for unigene UN31621
FASTA Sequence |
Unigene ID: UN31621 | Length: 576 |
SSR | | ATTCATATTATTCATCTTGAAAGTCTTGCGAGTTTATACACCCCAATATGCCAAACGTAAAAAAATATAATGCAATTAACGTAGAA
ACATATTTAGTTCCCTTTTCACCTAAGATGTTAGGTTATATCCTAACTAAATACGCACATTGTGATTAAAAAACAGACTACATACA
AAGATATTCATCAGTCTCCTTTAAGTAATTGATAAGAATGTCGATAATCCACATTGGATCTCCAATGTCATGACGGATCTTCTCGT
ACTCCACGGTCCACACCACACGGCTACCGTCGGTCTCATCTTCCTTGGGAGTGACCGTGATGGTTGCTTTGAACGTACTGTAGCTA
TCCGAGACTAGATTTCCACACATATCCAACGTCACTGTTCTTTTCTCCCAACCCACGGACTCAGTGATCTTCTCCTTTGATATTAT
GTCAAAAGTGCTATCTATGTCGTCGGTGAAAGATGTAAAGAACTCGTCCGCCGGTGACTTGATGTCAAACTTTCCGGAAGAAACTC
CATGTAGTGCTTCCATTCTCTCTCTCTCGATACTTATACAAGTATATTTTTATGAGGTCC
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GenBank top hits (Blast detail) | Score | e value |
NP_173811 polyketide cyclase/dehydrase and lipid transport-like protein [Arabidopsis thaliana] | 228 | 3e-017 |
1VJH Chain A, Crystal Structure Of Gene Product Of At1g24000 From Arabidopsis Thaliana | 220 | 2e-016 |
AAF87152 T23E23.17 [Arabidopsis thaliana] | 199 | 7e-014 |
XP_002893316 hypothetical protein ARALYDRAFT_335636 [Arabidopsis lyrata subsp. lyrata] | 180 | 1e-011 |
ABV89615 bet v I allergen family protein [Brassica rapa] | 159 | 3e-009 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P0C0B0 Uncharacterized protein At1g24000 | 228 | 1e-018 |
Q93VR4 MLP-like protein 423 | 154 | 6e-010 |
P0C0B1 Uncharacterized protein At1g24010 | 141 | 2e-008 |
Q9SSK5 MLP-like protein 43 | 129 | 5e-007 |
Q9SSK7 MLP-like protein 34 | 125 | 1e-006 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G24000.1 Bet v I allergen family protein | 228 | 1e-019 |
AT1G24020.1 MLP423 (MLP-LIKE PROTEIN 423) | 154 | 6e-011 |
AT1G23910.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Bet v I allergen family protein (TAIR:AT1G24000.1); Has 37 Blast hits to 35 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 149 | 2e-010 |
AT1G24010.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, guard cell, pedicel, root, carpel; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Bet v I allergen family protein (TAIR:AT1G24000.1); Has 23 Blast hits to 21 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 141 | 2e-009 |
AT1G70890.1 MLP43 (MLP-LIKE PROTEIN 43) | 129 | 5e-008 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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