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Information for unigene UN31621

FASTA Sequence
Unigene ID: UN31621Length: 576 SSR 
ATTCATATTATTCATCTTGAAAGTCTTGCGAGTTTATACACCCCAATATGCCAAACGTAAAAAAATATAATGCAATTAACGTAGAA
ACATATTTAGTTCCCTTTTCACCTAAGATGTTAGGTTATATCCTAACTAAATACGCACATTGTGATTAAAAAACAGACTACATACA
AAGATATTCATCAGTCTCCTTTAAGTAATTGATAAGAATGTCGATAATCCACATTGGATCTCCAATGTCATGACGGATCTTCTCGT
ACTCCACGGTCCACACCACACGGCTACCGTCGGTCTCATCTTCCTTGGGAGTGACCGTGATGGTTGCTTTGAACGTACTGTAGCTA
TCCGAGACTAGATTTCCACACATATCCAACGTCACTGTTCTTTTCTCCCAACCCACGGACTCAGTGATCTTCTCCTTTGATATTAT
GTCAAAAGTGCTATCTATGTCGTCGGTGAAAGATGTAAAGAACTCGTCCGCCGGTGACTTGATGTCAAACTTTCCGGAAGAAACTC
CATGTAGTGCTTCCATTCTCTCTCTCTCGATACTTATACAAGTATATTTTTATGAGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173811 polyketide cyclase/dehydrase and lipid transport-like protein [Arabidopsis thaliana]2283e-017
1VJH Chain A, Crystal Structure Of Gene Product Of At1g24000 From Arabidopsis Thaliana2202e-016
AAF87152 T23E23.17 [Arabidopsis thaliana]1997e-014
XP_002893316 hypothetical protein ARALYDRAFT_335636 [Arabidopsis lyrata subsp. lyrata]1801e-011
ABV89615 bet v I allergen family protein [Brassica rapa]1593e-009

Swiss-Prot top hits (Blast detail)Scoree value
P0C0B0 Uncharacterized protein At1g240002281e-018
Q93VR4 MLP-like protein 4231546e-010
P0C0B1 Uncharacterized protein At1g240101412e-008
Q9SSK5 MLP-like protein 431295e-007
Q9SSK7 MLP-like protein 341251e-006

TrEMBL top hits (Blast detail)Scoree value
A8IXG5 Bet v I allergen family protein1592e-009
Q9LRA2 T23E23.81493e-008

Arabidopsis top hits (Blast detail)Scoree value
AT1G24000.1 Bet v I allergen family protein2281e-019
AT1G24020.1 MLP423 (MLP-LIKE PROTEIN 423)1546e-011
AT1G23910.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Bet v I allergen family protein (TAIR:AT1G24000.1); Has 37 Blast hits to 35 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1492e-010
AT1G24010.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, guard cell, pedicel, root, carpel; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Bet v I allergen family protein (TAIR:AT1G24000.1); Has 23 Blast hits to 21 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1412e-009
AT1G70890.1 MLP43 (MLP-LIKE PROTEIN 43)1295e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information