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Information for unigene UN31742

FASTA Sequence
Unigene ID: UN31742Length: 1092 SSR 
AGTACGGATGAAAGCTCATTACTTAAGATTCATTACAATTCAGAAGAAGACAAAGTATTGGCTTGGCATGATCTTTACACAACAAA
AGAAAGACAGAGTGTGTAGCAGCAAAATAGGCTTCAGACCAAAACCAATTATCCTAAAGCCATAGTTGTAACGACATAAAGCCAAA
GTTGCCTGAATTAATTACCAGCATTAGGCAAAGCAGCCATGAAGGAGTTGTAAGAAGACTCAAGATCGAAGTGAAGCTGCCTGGCC
TGCTGCTCAGTGAGCTCATCAGAAGCTCCCATCTTAGACAACCTCAAAAGCCACTCTTTCATCTTAACCTTCCCTTCAAAATCCGG
CGGCAAAATACTCAGCTTACCAAGGGAAGCAGAGAGATCAGACAGCAACGGATACACCTGGTCAACAGCCACCATATTAAGCTTCA
AAGAATCCATACAAGTAATAAAATTCGGAACACACTCGGCGACAACGGAAGCAGAGCTCGAAGTAGACGCCGCCACCGCAGCGGCG
CGATGCTCCACGGTAGCCGGAACACCACCGGAGGTCACGAGGCGGTACACGGCAGCGGAGCAGTCCATCTTGTAGGTCTCGGCGAA
CCTCTCGATGTTGGGAACAGAGTCCTTGAGGGTGGTTGCGGAGAGGGTCTTGAAGTGGACGATGAGTTTCTGGCACTCGGTTTCGT
ATTGGGAAGGGGAGATGAGGTCGCGGATGTAGGCTTTTTCGAGCTTCTCGGTGGATTTGATGATGGCGTAGAGCTCGGAGAAGTTC
TCGTACATTTCGCGCTCACGCTTGTCGTTCCATAGCTTGATGACCTCCATGTTTTACTAGTTGTGGAGAAGAGGGATGGGACACGC
GCTGATGGAAGCGGAGAAAAAGCTTCCTTGAGGAAGCAAGTTGGGAGATCTCGATAGTCGAACTACTCTAGAGGTTGCGTGTAAGA
AGAGTGGGTCTTTATGATACTGATGAAGAAAGCTTCACGGCGGAACGAACTTCTTCTGTCTTTTGAGGGCGTTGACAAATAGAGAG
AGAGAGAGAGAGAGGATTGTCAGAGAGGCACCATGAGTGAAGGCTATGATTGATCTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193887 vacuolar protein sorting-associated protein 28-1 [Arabidopsis thaliana]9628e-102
BAJ33668 unnamed protein product [Thellungiella halophila]9564e-101
NP_567281 vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana]9181e-096
AAD48972 contains similarity to S. cerevisiae vacuolar protein sorting-associated protein VPS28 (GB:U39205) [Arabidopsis thaliana]9171e-096
XP_002872726 hypothetical protein ARALYDRAFT_490145 [Arabidopsis lyrata subsp. lyrata]9091e-095

Swiss-Prot top hits (Blast detail)Scoree value
O65421 Vacuolar protein sorting-associated protein 28 homolog 19623e-103
Q9S9T7 Vacuolar protein sorting-associated protein 28 homolog 29184e-098
Q54NF1 Vacuolar protein sorting-associated protein 285125e-051
Q3T178 Vacuolar protein sorting-associated protein 28 homolog2232e-017
Q9UK41 Vacuolar protein sorting-associated protein 28 homolog2232e-017

TrEMBL top hits (Blast detail)Scoree value
B9HYZ8 Predicted protein8864e-093
A9PBK3 Predicted protein8821e-092
B9S615 Vacuolar protein sorting-associated protein VPS28, putative8821e-092
A5BEL8 Putative uncharacterized protein8684e-091
D6BR67 Vacuolar protein sorting-associated protein VPS288622e-090

Arabidopsis top hits (Blast detail)Scoree value
AT4G21560.1 VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1); transporter9632e-104
AT4G21560.2 VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1); transporter9632e-104
AT4G21560.3 VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1); transporter9632e-104
AT4G05000.1 VPS28-2; transporter9193e-099
AT4G05000.2 VPS28-2; transporter9193e-099

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information